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  5. Seita.3G069600.1

Seita.3G069600.1


Description : component *(ADA3) of SAGA transcription co-activator complex


Gene families : OG_42_0001470 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001470_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G069600.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
407119 No alias Function unknown 0.02 Orthogroups_2024-Update
At5g22450 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.05 Orthogroups_2024-Update
Bradi2g28900 No alias Function unknown 0.11 Orthogroups_2024-Update
Bradi2g61842 No alias Function unknown 0.07 Orthogroups_2024-Update
GRMZM2G013100 No alias Function unknown 0.05 Orthogroups_2024-Update
GRMZM2G142456 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.12G088600 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.13G106700 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.15G172400 No alias Function unknown 0.05 Orthogroups_2024-Update
HORVU1Hr1G060010.4 No alias component *(ADA3) of SAGA transcription co-activator complex 0.04 Orthogroups_2024-Update
MA_107341g0010 No alias (at4g29790 : 417.0) unknown protein; BEST Arabidopsis... 0.05 Orthogroups_2024-Update
PSME_00024678-RA No alias (at4g29790 : 534.0) unknown protein; BEST Arabidopsis... 0.06 Orthogroups_2024-Update
Potri.004G203500 No alias Function unknown 0.04 Orthogroups_2024-Update
Sobic.003G422500.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.03 Orthogroups_2024-Update
Sobic.009G005500.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.03 Orthogroups_2024-Update
Solyc07g040980 No alias Serine/arginine repetitive matrix protein 2 isoform 2... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019902 phosphatase binding IEP Predicted GO
MF GO:0019903 protein phosphatase binding IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061666 UFM1 ligase activity IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!