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  5. Seita.3G121500.1

Seita.3G121500.1


Description : chromatin remodeling factor *(Mot1) & TATA box-binding protein-associated factor *(MOT1)


Gene families : OG_42_0004078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G121500.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
186944 No alias DNA binding;ATP binding;nucleic acid... 0.03 Orthogroups_2024-Update
Bradi2g14340 No alias DNA binding;ATP binding;nucleic acid... 0.07 Orthogroups_2024-Update
Cre16.g687301 No alias DNA binding;ATP binding;nucleic acid... 0.02 Orthogroups_2024-Update
Glyma.09G234400 No alias DNA binding;ATP binding;nucleic acid... 0.05 Orthogroups_2024-Update
Glyma.12G002300 No alias DNA binding;ATP binding;nucleic acid... 0.03 Orthogroups_2024-Update
HORVU1Hr1G094870.2 No alias chromatin remodeling factor *(Mot1) & TATA box-binding... 0.04 Orthogroups_2024-Update
MA_10430482g0010 No alias (at3g54280 : 297.0) ROOT GROWTH DEFECTIVE 3 (RGD3);... 0.06 Orthogroups_2024-Update
MA_139472g0010 No alias (at3g54280 : 246.0) ROOT GROWTH DEFECTIVE 3 (RGD3);... 0.03 Orthogroups_2024-Update
PSME_00005283-RA No alias (at3g54280 : 1379.0) ROOT GROWTH DEFECTIVE 3 (RGD3);... 0.05 Orthogroups_2024-Update
Sobic.009G256400.1 No alias chromatin remodeling factor *(Mot1) & TATA box-binding... 0.03 Orthogroups_2024-Update
Solyc08g074520 No alias TATA-binding protein associated factor-like protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000330 SNF2_N 1477 1768
IPR022707 DUF3535 786 1240
IPR001650 Helicase_C 1827 1929
IPR000357 HEAT 1300 1329
No external refs found!