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  5. Seita.3G121600.1

Seita.3G121600.1


Description : component *(EAF1) of NuA4 histone acetyltransferase complex


Gene families : OG_42_0002455 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G121600.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
424802 No alias Helicase/SANT-associated, DNA binding protein 0.04 Orthogroups_2024-Update
At3g24870 No alias Chromatin modification-related protein EAF1 B... 0.04 Orthogroups_2024-Update
Bradi2g14375 No alias Helicase/SANT-associated, DNA binding protein 0.1 Orthogroups_2024-Update
Bradi2g41720 No alias Helicase/SANT-associated, DNA binding protein 0.09 Orthogroups_2024-Update
GRMZM2G018142 No alias Helicase/SANT-associated, DNA binding protein 0.02 Orthogroups_2024-Update
GRMZM2G316740 No alias Helicase/SANT-associated, DNA binding protein 0.08 Orthogroups_2024-Update
GRMZM2G350628 No alias Helicase/SANT-associated, DNA binding protein 0.03 Orthogroups_2024-Update
GRMZM2G440951 No alias Helicase/SANT-associated, DNA binding protein 0.02 Orthogroups_2024-Update
Glyma.03G081300 No alias Helicase/SANT-associated, DNA binding protein 0.07 Orthogroups_2024-Update
Glyma.08G352600 No alias Helicase/SANT-associated, DNA binding protein 0.06 Orthogroups_2024-Update
Glyma.16G093800 No alias Helicase/SANT-associated, DNA binding protein 0.04 Orthogroups_2024-Update
Glyma.18G169600 No alias Helicase/SANT-associated, DNA binding protein 0.07 Orthogroups_2024-Update
Kfl00231_0110 kfl00231_0110_v1.1 (at3g24870 : 95.5) Helicase/SANT-associated, DNA binding... 0.01 Orthogroups_2024-Update
Mp2g02900.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.04 Orthogroups_2024-Update
Pp1s6_392V6 No alias dna binding 0.02 Orthogroups_2024-Update
Sobic.003G196300.2 No alias component *(EAF1) of NuA4 histone acetyltransferase complex 0.07 Orthogroups_2024-Update
Sobic.009G256300.1 No alias component *(EAF1) of NuA4 histone acetyltransferase complex 0.06 Orthogroups_2024-Update
Solyc06g083420 No alias Helicase/SANT-associated, DNA binding protein (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009306 protein secretion IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR014012 HSA_dom 549 590
No external refs found!