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Description : E3 ubiquitin ligase *(HUB)
Gene families : OG_42_0001988 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001988_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.4G189800.1 | |
| Cluster | HCAA Clusters: Cluster_60 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At2g44950 | No alias | E3 ubiquitin-protein ligase BRE1-like 1... | 0.02 | Orthogroups_2024-Update | |
| Bradi2g33230 | No alias | histone mono-ubiquitination 2 | 0.03 | Orthogroups_2024-Update | |
| Bradi4g25177 | No alias | histone mono-ubiquitination 1 | 0.05 | Orthogroups_2024-Update | |
| Cre14.g625802 | No alias | histone mono-ubiquitination 2 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G162184 | No alias | histone mono-ubiquitination 1 | 0.05 | Orthogroups_2024-Update | |
| Glyma.02G267300 | No alias | histone mono-ubiquitination 2 | 0.03 | Orthogroups_2024-Update | |
| Glyma.14G050200 | No alias | histone mono-ubiquitination 2 | 0.05 | Orthogroups_2024-Update | |
| HORVU3Hr1G099950.5 | No alias | E3 ubiquitin ligase *(HUB) | 0.06 | Orthogroups_2024-Update | |
| LOC_Os04g46450 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| Mp6g03540.1 | No alias | RING-HC-class E3 ligase | 0.02 | Orthogroups_2024-Update | |
| Pp1s14_61V6 | No alias | histone ubiquitination proteins group | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00000169.18 | No alias | (at1g55250 : 113.0) Encodes one of two orthologous E3... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
| MF | GO:0004143 | diacylglycerol kinase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Predicted GO |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Predicted GO |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| BP | GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
| MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
| BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| BP | GO:0016571 | histone methylation | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Predicted GO |
| MF | GO:0017025 | TBP-class protein binding | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
| MF | GO:0061666 | UFM1 ligase activity | IEP | Predicted GO |
| MF | GO:0071568 | UFM1 transferase activity | IEP | Predicted GO |
| BP | GO:0071569 | protein ufmylation | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |