1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G243900.1

Seita.4G243900.1


Description : Unknown function


Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G243900.1
Cluster HCAA Clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Brara.E00843.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.U008800 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G101110.10 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g30220 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
Seita.8G088800.1 No alias DLSV protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.9G375200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G096300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G249000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g026110 No alias Disease resistance family protein (AHRD V3.3 *** B9GY55_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009306 protein secretion IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
CC GO:0071203 WASH complex IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 181 425
No external refs found!