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  5. Seita.4G274500.1

Seita.4G274500.1


Description : peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2 cis-trans-isomerase


Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G274500.1
Cluster HCAA Clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
A4A49_61042 No alias peptidyl-prolyl cis-trans isomerase cyp20-1 0.02 Orthogroups_2024-Update
Brara.C01118.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... 0.03 Orthogroups_2024-Update
Brara.E01328.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... 0.03 Orthogroups_2024-Update
Cre06.g262300 No alias Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.06 Orthogroups_2024-Update
Cre06.g284900 No alias cyclophilin 5 0.06 Orthogroups_2024-Update
Cre12.g495951 No alias cyclophilin 20-2 0.01 Orthogroups_2024-Update
Glyma.10G298200 No alias cyclophilin 20-2 0.03 Orthogroups_2024-Update
Kfl00289_0160 kfl00289_0160_v1.1 (q41651|cypb_vicfa : 197.0) Peptidyl-prolyl cis-trans... 0.02 Orthogroups_2024-Update
Potri.001G251700 No alias cyclophilin 5 0.04 Orthogroups_2024-Update
Sobic.010G258000.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... 0.08 Orthogroups_2024-Update
evm.model.tig00001636.9 No alias (at2g29960 : 249.0) encodes a cyclophilin protein that... 0.02 Orthogroups_2024-Update
evm.model.tig00020904.49 No alias (at5g13120 : 180.0) Encodes a lumenal cyclophilin with... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA 16Dec
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0034998 oligosaccharyltransferase I complex IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
CC GO:0045273 respiratory chain complex II IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 49 209
No external refs found!