1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G225500.1

Seita.5G225500.1


Description : autophagosome E1 ATG8/12 ubiquitin-activating enzyme *(ATG7)


Gene families : OG_42_0007489 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007489_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G225500.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
164297 No alias ThiF family protein 0.02 Orthogroups_2024-Update
Bradi2g43480 No alias ThiF family protein 0.03 Orthogroups_2024-Update
Cre03.g165215 No alias ThiF family protein 0.01 Orthogroups_2024-Update
HORVU3Hr1G054070.22 No alias autophagosome E1 ATG8/12 ubiquitin-activating enzyme *(ATG7) 0.04 Orthogroups_2024-Update
Kfl00466_0030 kfl00466_0030_v1.1 (at5g45900 : 358.0) Component of autophagy conjugation... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0002790 peptide secretion IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009306 protein secretion IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000594 ThiF_NAD_FAD-bd 749 983
IPR000594 ThiF_NAD_FAD-bd 416 649
IPR032197 Atg7_N 92 390
No external refs found!