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Description : RNA editing factor *(MORF)
Gene families : OG_42_0000510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000510_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.6G068800.1 | |
| Cluster | HCAA Clusters: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g14650 | No alias | plastid developmental protein DAG, putative | 0.09 | Orthogroups_2024-Update | |
| Bradi5g20660 | No alias | differentiation and greening-like 1 | 0.08 | Orthogroups_2024-Update | |
| Brara.A01086.1 | No alias | RNA editing factor *(MORF) | 0.04 | Orthogroups_2024-Update | |
| Brara.C03552.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
| Brara.D02033.1 | No alias | RNA editing factor *(MORF) | 0.04 | Orthogroups_2024-Update | |
| Brara.D02132.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
| Brara.E01050.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
| Brara.G00411.1 | No alias | RNA editing factor *(MORF) | 0.04 | Orthogroups_2024-Update | |
| Brara.K01028.1 | No alias | RNA editing factor *(MORF) | 0.04 | Orthogroups_2024-Update | |
| Glyma.12G228400 | No alias | cobalt ion binding | 0.04 | Orthogroups_2024-Update | |
| LOC_Os08g04450 | No alias | DAG protein, chloroplast precursor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os09g04670 | No alias | DAG protein, chloroplast precursor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Potri.008G169900 | No alias | plastid developmental protein DAG, putative | 0.06 | Orthogroups_2024-Update | |
| Potri.011G112200 | No alias | cobalt ion binding | 0.03 | Orthogroups_2024-Update | |
| Sobic.006G204100.1 | No alias | RNA editing factor *(MORF) | 0.06 | Orthogroups_2024-Update | |
| Sobic.007G034500.1 | No alias | RNA editing factor *(MORF) | 0.06 | Orthogroups_2024-Update | |
| Solyc02g079770 | No alias | DAG protein (AHRD V3.3 *** B6TYI4_MAIZE) | 0.05 | Orthogroups_2024-Update | |
| Solyc05g054960 | No alias | Peroxisome biogenesis protein 12 (AHRD V3.3 *** K4C2H2_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Solyc06g008220 | No alias | DAG protein (AHRD V3.3 *** A0A0K9Q0F0_ZOSMR) | 0.05 | Orthogroups_2024-Update | |
| Sopen02g024010 | No alias | hypothetical protein | 0.02 | Orthogroups_2024-Update | |
| Sopen02g024540 | No alias | hypothetical protein | 0.05 | Orthogroups_2024-Update | |
| Sopen05g033420 | No alias | hypothetical protein | 0.02 | Orthogroups_2024-Update | |
| Sopen06g003080 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
| Sopen10g003300 | No alias | hypothetical protein | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
| MF | GO:0004556 | alpha-amylase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
| BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predicted GO |
| CC | GO:0019867 | outer membrane | IEP | Predicted GO |
| MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predicted GO |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
| BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |