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  5. Seita.7G079400.1

Seita.7G079400.1


Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.7G079400.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
411118 No alias casein lytic proteinase B3 0.03 Orthogroups_2024-Update
Bradi3g44335 No alias CLPC homologue 1 0.07 Orthogroups_2024-Update
Bradi3g44341 No alias CLPC homologue 1 0.07 Orthogroups_2024-Update
Cre11.g467575 No alias casein lytic proteinase B3 0.01 Orthogroups_2024-Update
Cre12.g533351 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Cre43.g760497 No alias CLPC homologue 1 0.01 Orthogroups_2024-Update
HORVU4Hr1G090440.2 No alias organellar chaperone *(Clp-p/Clp-m) 0.04 Orthogroups_2024-Update
Mp1g02560.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.02 Orthogroups_2024-Update
Mp1g08840.1 No alias Chaperone protein ClpC2, chloroplastic OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Potri.017G090600 No alias casein lytic proteinase B3 0.03 Orthogroups_2024-Update
Pp1s23_102V6 No alias atpase aaa-2 domain protein 0.03 Orthogroups_2024-Update
Pp1s81_51V6 No alias atpase aaa-2 domain protein 0.02 Orthogroups_2024-Update
Pp1s88_195V6 No alias atpase aaa-2 domain protein 0.02 Orthogroups_2024-Update
Sobic.006G058100.1 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.04 Orthogroups_2024-Update
Sopen12g021150 No alias AAA domain (Cdc48 subfamily) 0.03 Orthogroups_2024-Update
evm.model.contig_487.1 No alias (p35100|clpc_pea : 624.0) ATP-dependent Clp protease... 0.01 Orthogroups_2024-Update
evm.model.tig00000655.28 No alias (at5g50920 : 1134.0) Encodes a protein that is similar... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003919 FMN adenylyltransferase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071897 DNA biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 814 893
IPR004176 Clp_N 105 157
IPR004176 Clp_N 181 232
IPR003959 ATPase_AAA_core 296 412
IPR003959 ATPase_AAA_core 633 807
No external refs found!