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  5. Seita.9G429000.1

Seita.9G429000.1


Description : catalytic component *(CLF/SWN/MEA) of PRC2 histone methylation complex


Gene families : OG_42_0002039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G429000.1
Cluster HCAA Clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
At4g02020 No alias Histone-lysine N-methyltransferase EZA1... 0.03 Orthogroups_2024-Update
Bradi1g64460 No alias SET domain-containing protein 0.05 Orthogroups_2024-Update
Cre17.g746247 No alias SET domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.02G012100 No alias SET domain-containing protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G053740.8 No alias catalytic component *(CLF/SWN/MEA) of PRC2 histone... 0.03 Orthogroups_2024-Update
Sopen02g037780 No alias SET domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0071203 WASH complex IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001214 SET_dom 760 863
No external refs found!