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  5. Seita.9G515800.1

Seita.9G515800.1


Description : night-time repressor *(COR27)


Gene families : OG_42_0003967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G515800.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
448001 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
At4g33980 No alias BEST Arabidopsis thaliana protein match is: cold... 0.03 Orthogroups_2024-Update
Bradi1g72390 No alias cold regulated gene 27 0.06 Orthogroups_2024-Update
Brara.K00969.1 No alias night-time repressor *(COR27) 0.02 Orthogroups_2024-Update
GRMZM2G130232 No alias Function unknown 0.04 Orthogroups_2024-Update
GRMZM5G815358 No alias cold regulated gene 27 0.05 Orthogroups_2024-Update
Glyma.14G083000 No alias cold regulated gene 27 0.05 Orthogroups_2024-Update
Glyma.17G242100 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
HORVU4Hr1G077480.3 No alias night-time repressor *(COR27) 0.05 Orthogroups_2024-Update
HORVU4Hr1G089560.2 No alias night-time repressor *(COR27) 0.06 Orthogroups_2024-Update
LOC_Os03g08580 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os10g25060 No alias expressed protein 0.04 Orthogroups_2024-Update
PSME_00024744-RA No alias (at1g05120 : 101.0) Helicase protein with RING/U-box... 0.03 Orthogroups_2024-Update
Potri.002G125900 No alias cold regulated gene 27 0.03 Orthogroups_2024-Update
Potri.009G101400 No alias cold regulated gene 27 0.03 Orthogroups_2024-Update
Sobic.001G480400.1 No alias night-time repressor *(COR27) 0.06 Orthogroups_2024-Update
Solyc04g078880 No alias Cold regulated gene 27, putative isoform 1 (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen04g032480 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!