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  5. Seita.9G576200.1

Seita.9G576200.1


Description : component *(MED12) of kinase module of MEDIATOR transcription co-activator complex


Gene families : OG_42_0004166 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G576200.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
441953 No alias RNA polymerase II transcription mediators 0.06 Orthogroups_2024-Update
At4g00450 No alias Mediator of RNA polymerase II transcription subunit 12... 0.03 Orthogroups_2024-Update
Bradi1g21177 No alias RNA polymerase II transcription mediators 0.1 Orthogroups_2024-Update
GRMZM2G114459 No alias RNA polymerase II transcription mediators 0.08 Orthogroups_2024-Update
GRMZM5G844080 No alias RNA polymerase II transcription mediators 0.03 Orthogroups_2024-Update
Glyma.03G009200 No alias RNA polymerase II transcription mediators 0.04 Orthogroups_2024-Update
Glyma.07G070700 No alias RNA polymerase II transcription mediators 0.05 Orthogroups_2024-Update
Glyma.18G232900 No alias RNA polymerase II transcription mediators 0.07 Orthogroups_2024-Update
HORVU4Hr1G087360.1 No alias component *(MED12) of kinase module of MEDIATOR... 0.03 Orthogroups_2024-Update
LOC_Os07g45400 No alias expressed protein 0.02 Orthogroups_2024-Update
MpVg00710.12 No alias No annotation 0.06 Orthogroups_2024-Update
Pp1s16_265V6 No alias F5I10.24; expressed protein [Arabidopsis thaliana] 0.06 Orthogroups_2024-Update
Sobic.001G540400.2 No alias component *(MED12) of kinase module of MEDIATOR... 0.09 Orthogroups_2024-Update
Solyc01g094620 No alias Mediator of RNA polymerase II transcription subunit 12... 0.03 Orthogroups_2024-Update
Sopen01g038430 No alias Transcription mediator complex subunit Med12 0.05 Orthogroups_2024-Update
evm.model.tig00000042.125 No alias (at4g00450 : 87.8) Encodes the Arabidopsis homolog of... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEA 16Dec
BP GO:0006357 regulation of transcription by RNA polymerase II IEA 16Dec
CC GO:0016592 mediator complex IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0019902 phosphatase binding IEP Predicted GO
MF GO:0019903 protein phosphatase binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061666 UFM1 ligase activity IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
InterPro domains Description Start Stop
IPR019035 Mediator_Med12 154 214
No external refs found!