Coexpression cluster: Cluster_3 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 7.21% (8/111) 6.34 0.0 0.0
GO:0030089 phycobilisome 4.5% (5/111) 7.53 0.0 0.0
GO:0030076 light-harvesting complex 4.5% (5/111) 7.53 0.0 0.0
GO:0098796 membrane protein complex 7.21% (8/111) 4.41 0.0 0.0
GO:0015979 photosynthesis 4.5% (5/111) 5.95 0.0 0.0
GO:0044425 membrane part 10.81% (12/111) 2.74 0.0 7e-06
GO:0005575 cellular_component 14.41% (16/111) 1.53 0.000123 0.001845
GO:0010109 regulation of photosynthesis 1.8% (2/111) 6.8 0.000119 0.001969
GO:0042548 regulation of photosynthesis, light reaction 1.8% (2/111) 6.8 0.000119 0.001969
GO:0043467 regulation of generation of precursor metabolites and energy 1.8% (2/111) 6.8 0.000119 0.001969
GO:0042549 photosystem II stabilization 1.8% (2/111) 6.8 0.000119 0.001969
GO:0032991 protein-containing complex 7.21% (8/111) 2.08 0.000628 0.008634
GO:0009523 photosystem II 1.8% (2/111) 5.63 0.000706 0.008957
GO:0009654 photosystem II oxygen evolving complex 1.8% (2/111) 5.34 0.001072 0.012632
GO:0009521 photosystem 1.8% (2/111) 5.21 0.001282 0.014107
GO:1990204 oxidoreductase complex 1.8% (2/111) 4.8 0.002305 0.023765
GO:0042546 cell wall biogenesis 0.9% (1/111) 7.8 0.004494 0.030893
GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity 0.9% (1/111) 7.8 0.004494 0.030893
GO:0004506 squalene monooxygenase activity 0.9% (1/111) 7.8 0.004494 0.030893
GO:0071554 cell wall organization or biogenesis 0.9% (1/111) 7.8 0.004494 0.030893
GO:0031127 alpha-(1,2)-fucosyltransferase activity 0.9% (1/111) 7.8 0.004494 0.030893
GO:0006658 phosphatidylserine metabolic process 0.9% (1/111) 7.8 0.004494 0.030893
GO:0006659 phosphatidylserine biosynthetic process 0.9% (1/111) 7.8 0.004494 0.030893
GO:0044424 intracellular part 7.21% (8/111) 1.63 0.004416 0.042862
GO:0044464 cell part 7.21% (8/111) 1.51 0.007134 0.047082
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Porphyridium purpureum HCCA clusters Cluster_40 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_221 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_27 0.021 Orthogroups_2024-Update Compare
Sequences (111) (download table)

InterPro Domains

GO Terms

Family Terms