Coexpression cluster: Cluster_133 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004645 phosphorylase activity 3.77% (2/53) 8.28 1.4e-05 0.000934
GO:0008184 glycogen phosphorylase activity 3.77% (2/53) 8.28 1.4e-05 0.000934
GO:0006996 organelle organization 5.66% (3/53) 4.96 0.000124 0.002856
GO:0006260 DNA replication 5.66% (3/53) 4.96 0.000124 0.002856
GO:0006259 DNA metabolic process 9.43% (5/53) 3.3 0.000154 0.003029
GO:0061505 DNA topoisomerase II activity 3.77% (2/53) 7.06 9.4e-05 0.00325
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 3.77% (2/53) 7.06 9.4e-05 0.00325
GO:0003916 DNA topoisomerase activity 3.77% (2/53) 6.28 0.000294 0.004058
GO:0006265 DNA topological change 3.77% (2/53) 6.28 0.000294 0.004058
GO:0008094 DNA-dependent ATPase activity 3.77% (2/53) 6.28 0.000294 0.004058
GO:0071103 DNA conformation change 3.77% (2/53) 5.96 0.000466 0.005844
GO:0090304 nucleic acid metabolic process 11.32% (6/53) 2.53 0.000584 0.006713
GO:0008092 cytoskeletal protein binding 5.66% (3/53) 4.11 0.000707 0.007505
GO:0003676 nucleic acid binding 13.21% (7/53) 2.19 0.000788 0.007767
GO:0009059 macromolecule biosynthetic process 7.55% (4/53) 3.14 0.001111 0.010223
GO:0051276 chromosome organization 3.77% (2/53) 4.96 0.001891 0.016307
GO:0016043 cellular component organization 5.66% (3/53) 3.55 0.002143 0.017393
GO:0071840 cellular component organization or biogenesis 5.66% (3/53) 3.42 0.002814 0.021572
GO:0044238 primary metabolic process 18.87% (10/53) 1.44 0.003161 0.022959
GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 1.89% (1/53) 7.86 0.004287 0.024648
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor 1.89% (1/53) 7.86 0.004287 0.024648
GO:0061731 ribonucleoside-diphosphate reductase activity 1.89% (1/53) 7.86 0.004287 0.024648
GO:0006139 nucleobase-containing compound metabolic process 11.32% (6/53) 1.99 0.003912 0.026995
GO:0016758 transferase activity, transferring hexosyl groups 3.77% (2/53) 4.25 0.00498 0.027489
GO:0006725 cellular aromatic compound metabolic process 11.32% (6/53) 1.89 0.005445 0.027831
GO:0071704 organic substance metabolic process 18.87% (10/53) 1.38 0.004242 0.027879
GO:0046483 heterocycle metabolic process 11.32% (6/53) 1.89 0.005309 0.028176
GO:1901360 organic cyclic compound metabolic process 11.32% (6/53) 1.87 0.005835 0.028756
GO:0034645 cellular macromolecule biosynthetic process 5.66% (3/53) 2.93 0.007248 0.034491
GO:0030145 manganese ion binding 1.89% (1/53) 6.54 0.010683 0.035101
GO:0004620 phospholipase activity 1.89% (1/53) 6.54 0.010683 0.035101
GO:0004629 phospholipase C activity 1.89% (1/53) 6.54 0.010683 0.035101
GO:0003779 actin binding 1.89% (1/53) 6.54 0.010683 0.035101
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 1.89% (1/53) 6.54 0.010683 0.035101
GO:0004435 phosphatidylinositol phospholipase C activity 1.89% (1/53) 6.54 0.010683 0.035101
GO:0005634 nucleus 3.77% (2/53) 3.64 0.011341 0.036397
GO:0015631 tubulin binding 3.77% (2/53) 3.62 0.011632 0.036481
GO:0042623 ATPase activity, coupled 3.77% (2/53) 3.89 0.008113 0.037321
GO:0043015 gamma-tubulin binding 1.89% (1/53) 6.86 0.008555 0.038085
GO:0044260 cellular macromolecule metabolic process 11.32% (6/53) 1.7 0.010042 0.038495
GO:0006353 DNA-templated transcription, termination 1.89% (1/53) 6.28 0.012806 0.039271
GO:1901363 heterocyclic compound binding 16.98% (9/53) 1.29 0.009975 0.03933
GO:0097159 organic cyclic compound binding 16.98% (9/53) 1.29 0.009975 0.03933
GO:0016757 transferase activity, transferring glycosyl groups 3.77% (2/53) 3.49 0.013757 0.040392
GO:0009987 cellular process 18.87% (10/53) 1.14 0.013479 0.040436
GO:0034641 cellular nitrogen compound metabolic process 11.32% (6/53) 1.71 0.00967 0.040439
GO:0140097 catalytic activity, acting on DNA 3.77% (2/53) 3.78 0.009399 0.040534
GO:0016298 lipase activity 1.89% (1/53) 6.06 0.014925 0.041192
GO:0007010 cytoskeleton organization 1.89% (1/53) 6.06 0.014925 0.041192
GO:0016853 isomerase activity 3.77% (2/53) 3.46 0.014393 0.041379
GO:0008152 metabolic process 18.87% (10/53) 1.08 0.017333 0.045999
GO:0043170 macromolecule metabolic process 13.21% (7/53) 1.38 0.017125 0.04634
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum pennellii HCCA clusters Cluster_170 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_354 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_396 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_97 0.026 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_81 0.024 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_124 0.031 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_39 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_110 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_129 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_149 0.031 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_8 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_169 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_184 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_198 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_209 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_249 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_445 0.027 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_67 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_79 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0125 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_62 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_247 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_384 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_87 0.029 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_200 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_254 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_29 0.027 Orthogroups_2024-Update Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms