1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g009820

Solyc04g009820


Description : GRF1-interacting factor-like protein (AHRD V3.3 *** G7I6V2_MEDTR)


Gene families : OG_42_0001707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001707_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g009820
Cluster HCCA clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
Brara.B03515.1 No alias SMARCL component *(AN3/GIF) of SWI/SNF chromatin... 0.03 Orthogroups_2024-Update
Brara.F02904.1 No alias SMARCL component *(AN3/GIF) of SWI/SNF chromatin... 0.06 Orthogroups_2024-Update
Glyma.10G164100 No alias SSXT family protein 0.04 Orthogroups_2024-Update
Potri.013G043700 No alias SSXT family protein 0.02 Orthogroups_2024-Update
Solyc10g009280 No alias GRF1-interacting factor-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007726 SS18_fam 19 77
No external refs found!