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  5. evm.model.tig00000405.68

evm.model.tig00000405.68


Description : (at3g12180 : 96.7) Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12390.1); Has 605 Blast hits to 605 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 316; Fungi - 159; Plants - 93; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 193.4) & (original description: no original description)


Gene families : OG_42_0001597 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001597_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000405.68
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
At3g12180 No alias Protein cornichon homolog 1... 0.02 Orthogroups_2024-Update
Brara.H02657.1 No alias membrane protein cargo receptor *(CNIH) 0.01 Orthogroups_2024-Update
Brara.I05117.1 No alias membrane protein cargo receptor *(CNIH) 0.02 Orthogroups_2024-Update
Glyma.10G093400 No alias Cornichon family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G017650.7 No alias membrane protein cargo receptor *(CNIH) 0.03 Orthogroups_2024-Update
PSME_00007516-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008452 RNA ligase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003377 Cornichon 6 126
No external refs found!