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  5. Solyc05g009170

Solyc05g009170


Description : Zinc finger family protein (AHRD V3.3 *** B9HWF8_POPTR)


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g009170
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_36210 No alias zinc finger protein 5 0.03 Orthogroups_2024-Update
At1g68360 No alias Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1] 0.03 Orthogroups_2024-Update
At3g58070 No alias GIS [Source:UniProtKB/TrEMBL;Acc:A0A178V7D1] 0.03 Orthogroups_2024-Update
At5g06650 No alias Zinc finger protein GIS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG05] 0.02 Orthogroups_2024-Update
At5g57520 No alias Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261] 0.06 Orthogroups_2024-Update
Bradi4g03460 No alias zinc finger protein 7 0.06 Orthogroups_2024-Update
Brara.B00008.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.B02398.1 No alias C2H2 subclass ZFP transcription factor 0.06 Orthogroups_2024-Update
Brara.B03462.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.D02576.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Brara.G02683.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.G03704.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G013960 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
GRMZM2G082686 No alias zinc finger protein 7 0.02 Orthogroups_2024-Update
GRMZM2G133552 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G029100 No alias zinc finger protein 6 0.03 Orthogroups_2024-Update
Glyma.02G242600 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
Glyma.03G067700 No alias zinc-finger protein 10 0.03 Orthogroups_2024-Update
Glyma.03G160700 No alias zinc finger protein 11 0.04 Orthogroups_2024-Update
Glyma.03G217900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G063200 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Glyma.07G135900 No alias zinc-finger protein 10 0.02 Orthogroups_2024-Update
Glyma.08G356600 No alias C2H2-like zinc finger protein 0.07 Orthogroups_2024-Update
Glyma.10G273800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G059500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G230200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G269400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G110900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G212000 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
Glyma.18G036000 No alias zinc-finger protein 10 0.04 Orthogroups_2024-Update
Glyma.18G295500 No alias zinc finger protein 6 0.04 Orthogroups_2024-Update
Glyma.19G150800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g05490 No alias ZOS3-02 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g05900 No alias ZOS7-02 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g38610 No alias ZOS9-18 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g39220 No alias ZOS12-08 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g42250 No alias ZOS12-10 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_57501g0010 No alias (at5g25160 : 119.0) Encodes a zinc finger protein... 0.02 Orthogroups_2024-Update
Potri.003G180600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G097900 No alias zinc finger protein 6 0.04 Orthogroups_2024-Update
Potri.008G059000 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G121200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G138000 No alias zinc finger protein 4 0.04 Orthogroups_2024-Update
Potri.008G163900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G122400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G124200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G178200 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Potri.017G062500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G116300 No alias zinc finger protein 6 0.03 Orthogroups_2024-Update
Potri.017G134800 No alias zinc finger protein 7 0.02 Orthogroups_2024-Update
Pp1s210_74V6 No alias nucleic acid binding 0.03 Orthogroups_2024-Update
Seita.2G035000.1 No alias C2H2 subclass ZFP transcription factor 0.08 Orthogroups_2024-Update
Seita.2G305800.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Seita.2G375500.1 No alias C2H2 subclass ZFP transcription factor 0.05 Orthogroups_2024-Update
Seita.3G391200.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Seita.5G090200.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Seita.9G170900.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Seita.9G388200.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G036800.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G037300.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Solyc03g117070 No alias Zinc finger protein, putative (AHRD V3.3 *** B9SMU5_RICCO) 0.04 Orthogroups_2024-Update
Solyc10g078970 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g001220 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Sopen01g026560 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen05g004900 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen09g024930 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!