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  5. LOC_Os02g07690

LOC_Os02g07690


Description : VQ domain containing protein, putative, expressed


Gene families : OG_42_0000723 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g07690
Cluster HCCA clusters: cluster_0058

Target Alias Description ECC score Gene Family Method Actions
A4A49_40268 No alias vq motif-containing protein 22 0.03 Orthogroups_2024-Update
AC207043.3_FG002 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
Brara.A00045.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G420715 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
Glyma.06G104400 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
Glyma.14G002800 No alias VQ motif-containing protein 0.05 Orthogroups_2024-Update
Glyma.15G158200 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G058170.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g31660 No alias VQ domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10430864g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_84113g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00027352-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.001G158800 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
Potri.005G076600 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
Potri.006G006300 No alias VQ motif-containing protein 0.04 Orthogroups_2024-Update
Potri.016G017900 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
Seita.1G070200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.4G268900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G185200.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G058000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G124301.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g068460 No alias LOW QUALITY:VQ motif-containing protein, putative (AHRD... 0.02 Orthogroups_2024-Update
Solyc02g068470 No alias LOW QUALITY:VQ motif-containing protein, putative (AHRD... 0.02 Orthogroups_2024-Update
Solyc07g043250 No alias LOW QUALITY:VQ motif-containing protein, putative (AHRD... 0.02 Orthogroups_2024-Update
Sopen02g010250 No alias VQ motif 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008889 VQ 76 103
No external refs found!