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  5. LOC_Os08g39450

LOC_Os08g39450


Description : AN1-like zinc finger domain containing protein, expressed


Gene families : OG_42_0000255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g39450
Cluster HCCA clusters: cluster_0068

Target Alias Description ECC score Gene Family Method Actions
Bradi3g07060 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
Brara.A03325.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G083894 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.12G238400 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.13G204100 No alias A20/AN1-like zinc finger family protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G050270.3 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00014851-RA No alias (at3g52800 : 155.0) A20/AN1-like zinc finger family... 0.02 Orthogroups_2024-Update
PSME_00056636-RA No alias (at1g51200 : 149.0) A20/AN1-like zinc finger family... 0.02 Orthogroups_2024-Update
Potri.007G078500 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
Potri.012G130100 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
Seita.1G179600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G245800.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc12g100060 No alias Zinc finger A20 and AN1 domain-containing... 0.03 Orthogroups_2024-Update
Sopen01g008490 No alias AN1-like Zinc finger 0.02 Orthogroups_2024-Update
Sopen10g032930 No alias AN1-like Zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000058 Znf_AN1 111 148
IPR002653 Znf_A20 21 42
No external refs found!