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  5. LOC_Os10g25230

LOC_Os10g25230


Description : ZIM domain containing protein, putative, expressed


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g25230
Cluster HCCA clusters: cluster_0005

Target Alias Description ECC score Gene Family Method Actions
A4A49_10090 No alias protein tify 10a 0.04 Orthogroups_2024-Update
A4A49_42021 No alias protein tify 10a 0.03 Orthogroups_2024-Update
Bradi1g39920 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi3g23220 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Bradi4g31240 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Brara.I04752.1 No alias TIFY-type transcription factor 0.01 Orthogroups_2024-Update
Brara.K00975.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
GRMZM2G145412 No alias jasmonate-zim-domain protein 11 0.05 Orthogroups_2024-Update
GRMZM2G145458 No alias jasmonate-zim-domain protein 11 0.05 Orthogroups_2024-Update
GRMZM5G838098 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G031310.5 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.02 Orthogroups_2024-Update
HORVU5Hr1G062290.6 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
MA_10426545g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10426545g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10436587g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_116760g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_260312g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00014976-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00024545-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00024561-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00046059-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Pp1s15_170V6 No alias F1L3.3; expressed protein [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update
Pp1s88_114V6 No alias MEB5.8; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.2G388400.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.04 Orthogroups_2024-Update
Seita.9G251600.1 No alias TIFY-type transcription factor 0.05 Orthogroups_2024-Update
Seita.9G252100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G252500.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.04 Orthogroups_2024-Update
Seita.9G517900.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G518000.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G259600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G259700.1 No alias TIFY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G259900.1 No alias TIFY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G482600.1 No alias TIFY-type transcription factor 0.07 Orthogroups_2024-Update
Sobic.001G482700.1 No alias TIFY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G374100.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
Solyc12g009220 No alias jasmonate ZIM-domain protein 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006189 'de novo' IMP biosynthetic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018467 CCT_CS 123 148
IPR010399 Tify_dom 67 99
No external refs found!