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  5. LOC_Os12g43970

LOC_Os12g43970


Description : hydrolase, alpha/beta fold family domain containing protein, expressed


Gene families : OG_42_0000238 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g43970
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
Cre01.g010550 No alias alpha/beta-Hydrolases superfamily protein 0.01 Orthogroups_2024-Update
Glyma.19G231700 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G070830.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp3g24800.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
Seita.9G024300.1 No alias epoxide hydrolase *(EH) 0.03 Orthogroups_2024-Update
Sobic.001G025101.1 No alias epoxide hydrolase *(EH) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 31 305
No external refs found!