Description : (at5g02610 : 210.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (q8l805|rl35_wheat : 116.0) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 420.0) & (original description: no original description)
Gene families : OG_42_0001364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001364_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10429159g0020 | |
Cluster | HCCA clusters: Cluster_20 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
438324 | No alias | Ribosomal L29 family protein | 0.13 | Orthogroups_2024-Update | |
A4A49_28237 | No alias | 60s ribosomal protein l35-4 | 0.1 | Orthogroups_2024-Update | |
A4A49_63512 | No alias | 60s ribosomal protein l35-4 | 0.06 | Orthogroups_2024-Update | |
AC206642.4_FG001 | No alias | Ribosomal L29 family protein | 0.06 | Orthogroups_2024-Update | |
At2g39390 | No alias | 60S ribosomal protein L35-2... | 0.03 | Orthogroups_2024-Update | |
Bradi5g07170 | No alias | Ribosomal L29 family protein | 0.04 | Orthogroups_2024-Update | |
Brara.A03526.1 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Brara.B00059.1 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.C02014.1 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Brara.C03268.1 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
Brara.E03085.1 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Cre14.g617900 | No alias | Ribosomal L29 family protein | 0.13 | Orthogroups_2024-Update | |
GRMZM2G043279 | No alias | Ribosomal L29 family protein | 0.07 | Orthogroups_2024-Update | |
Glyma.10G291500 | No alias | Ribosomal L29 family protein | 0.09 | Orthogroups_2024-Update | |
Glyma.20G240700 | No alias | Ribosomal L29 family protein | 0.08 | Orthogroups_2024-Update | |
HORVU2Hr1G068120.2 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Kfl00608_0050 | kfl00608_0050_v1.1 | (at5g02610 : 177.0) Ribosomal L29 family protein ;... | 0.05 | Orthogroups_2024-Update | |
LOC_Os02g30050 | No alias | ribosomal protein L29, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Mp6g05620.1 | No alias | component RPL35 of LSU proteome component | 0.06 | Orthogroups_2024-Update | |
PSME_00020825-RA | No alias | (at5g02610 : 157.0) Ribosomal L29 family protein ;... | 0.1 | Orthogroups_2024-Update | |
PSME_00033304-RA | No alias | (at5g02610 : 177.0) Ribosomal L29 family protein ;... | 0.05 | Orthogroups_2024-Update | |
Potri.008G048800 | No alias | Ribosomal L29 family protein | 0.04 | Orthogroups_2024-Update | |
Potri.010G212300 | No alias | Ribosomal L29 family protein | 0.07 | Orthogroups_2024-Update | |
Pp1s102_67V6 | No alias | 60s ribosomal protein l35 | 0.07 | Orthogroups_2024-Update | |
Pp1s133_93V6 | No alias | 60s ribosomal protein l35 | 0.12 | Orthogroups_2024-Update | |
Pp1s1_489V6 | No alias | 60s ribosomal protein l35 | 0.15 | Orthogroups_2024-Update | |
Seita.1G166300.1 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Seita.7G064700.1 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Sobic.004G152400.1 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
Sobic.004G152700.1 | No alias | component *(uL29) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Solyc04g010240 | No alias | 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) | 0.1 | Orthogroups_2024-Update | |
Solyc05g054810 | No alias | 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) | 0.1 | Orthogroups_2024-Update | |
Solyc06g075620 | No alias | 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) | 0.03 | Orthogroups_2024-Update | |
Sopen04g005430 | No alias | Ribosomal L29 protein | 0.06 | Orthogroups_2024-Update | |
Sopen05g033280 | No alias | Ribosomal L29 protein | 0.08 | Orthogroups_2024-Update | |
evm.model.contig_654.2 | No alias | (at5g02610 : 134.0) Ribosomal L29 family protein ;... | 0.12 | Orthogroups_2024-Update | |
evm.model.tig00000241.79 | No alias | (at3g55170 : 158.0) Ribosomal L29 family protein ;... | 0.1 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000149 | SNARE binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004061 | arylformamidase activity | IEP | Predicted GO |
MF | GO:0004359 | glutaminase activity | IEP | Predicted GO |
MF | GO:0004864 | protein phosphatase inhibitor activity | IEP | Predicted GO |
CC | GO:0005875 | microtubule associated complex | IEP | Predicted GO |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006568 | tryptophan metabolic process | IEP | Predicted GO |
BP | GO:0006569 | tryptophan catabolic process | IEP | Predicted GO |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | Predicted GO |
BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
BP | GO:0007030 | Golgi organization | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Predicted GO |
BP | GO:0009063 | cellular amino acid catabolic process | IEP | Predicted GO |
BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | Predicted GO |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0009310 | amine catabolic process | IEP | Predicted GO |
BP | GO:0009966 | regulation of signal transduction | IEP | Predicted GO |
BP | GO:0010646 | regulation of cell communication | IEP | Predicted GO |
BP | GO:0010921 | regulation of phosphatase activity | IEP | Predicted GO |
BP | GO:0016054 | organic acid catabolic process | IEP | Predicted GO |
CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
MF | GO:0019212 | phosphatase inhibitor activity | IEP | Predicted GO |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Predicted GO |
BP | GO:0019441 | tryptophan catabolic process to kynurenine | IEP | Predicted GO |
BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
MF | GO:0019829 | cation-transporting ATPase activity | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
MF | GO:0019905 | syntaxin binding | IEP | Predicted GO |
MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0023051 | regulation of signaling | IEP | Predicted GO |
CC | GO:0030286 | dynein complex | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
BP | GO:0031399 | regulation of protein modification process | IEP | Predicted GO |
BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Predicted GO |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Predicted GO |
BP | GO:0035303 | regulation of dephosphorylation | IEP | Predicted GO |
BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Predicted GO |
MF | GO:0036442 | proton-exporting ATPase activity | IEP | Predicted GO |
BP | GO:0042180 | cellular ketone metabolic process | IEP | Predicted GO |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0042402 | cellular biogenic amine catabolic process | IEP | Predicted GO |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042436 | indole-containing compound catabolic process | IEP | Predicted GO |
BP | GO:0042537 | benzene-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0042816 | vitamin B6 metabolic process | IEP | Predicted GO |
BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Predicted GO |
BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Predicted GO |
BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Predicted GO |
BP | GO:0044282 | small molecule catabolic process | IEP | Predicted GO |
CC | GO:0044430 | cytoskeletal part | IEP | Predicted GO |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Predicted GO |
BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
BP | GO:0046184 | aldehyde biosynthetic process | IEP | Predicted GO |
BP | GO:0046218 | indolalkylamine catabolic process | IEP | Predicted GO |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | Predicted GO |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Predicted GO |
BP | GO:0048583 | regulation of response to stimulus | IEP | Predicted GO |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Predicted GO |
BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0051336 | regulation of hydrolase activity | IEP | Predicted GO |
BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
BP | GO:0070189 | kynurenine metabolic process | IEP | Predicted GO |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Predicted GO |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001854 | Ribosomal_L29/L35 | 8 | 63 |
No external refs found! |