1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s170_93V6

Pp1s170_93V6


Description : MDC12.5; lateral organ boundaries (LOB) protein [Arabidopsis thaliana]


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s170_93V6
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
A4A49_17759 No alias lob domain-containing protein 4 0.03 Orthogroups_2024-Update
Bradi3g35280 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Brara.I00295.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Pp1s156_26V6 No alias T2P4.18; LOB domain protein 15 / lateral organ... 0.04 Orthogroups_2024-Update
Pp1s73_7V6 No alias lob domain-containing 0.04 Orthogroups_2024-Update
Solyc03g063140 No alias Asymmetric leaves 2 (AHRD V3.3 *** A0A1C9U0Z1_9FABA) 0.03 Orthogroups_2024-Update
Sopen06g022110 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 31 128
No external refs found!