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Pp1s271_49V6


Description : Arl1-family small GTPase


Gene families : OG_42_0000220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s271_49V6
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
At2g24765 No alias ADP-ribosylation factor 3... 0.03 Orthogroups_2024-Update
LOC_Os01g59790 No alias ADP-ribosylation factor, putative, expressed 0.01 Orthogroups_2024-Update
Mp8g06130.1 No alias ARF-GTPase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 176
No external refs found!