Description : (at5g25830 : 153.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description)
Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00001982-RA | |
Cluster | HCCA clusters: Cluster_244 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_00998 | No alias | gata transcription factor 15 | 0.03 | Orthogroups_2024-Update | |
A4A49_09786 | No alias | gata transcription factor 2 | 0.03 | Orthogroups_2024-Update | |
A4A49_15701 | No alias | gata transcription factor 1 | 0.03 | Orthogroups_2024-Update | |
A4A49_16466 | No alias | gata transcription factor 1 | 0.02 | Orthogroups_2024-Update | |
A4A49_17145 | No alias | gata transcription factor 8 | 0.03 | Orthogroups_2024-Update | |
At2g45050 | No alias | GATA transcription factor 2... | 0.03 | Orthogroups_2024-Update | |
At3g50870 | No alias | GATA transcription factor 18... | 0.03 | Orthogroups_2024-Update | |
At5g56860 | No alias | GATA transcription factor 21... | 0.02 | Orthogroups_2024-Update | |
Bradi1g78540 | No alias | GATA transcription factor 2 | 0.02 | Orthogroups_2024-Update | |
Brara.B01250.1 | No alias | transcription factor *(A/B-GATA) | 0.04 | Orthogroups_2024-Update | |
Brara.F02763.1 | No alias | transcription factor *(A/B-GATA) | 0.04 | Orthogroups_2024-Update | |
Brara.I01080.1 | No alias | transcription factor *(A/B-GATA) | 0.03 | Orthogroups_2024-Update | |
Brara.K00334.1 | No alias | transcription factor *(A/B-GATA) | 0.02 | Orthogroups_2024-Update | |
GRMZM2G031983 | No alias | GATA type zinc finger transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.02G056600 | No alias | GATA type zinc finger transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.02G073900 | No alias | GATA transcription factor 4 | 0.04 | Orthogroups_2024-Update | |
Glyma.07G108900 | No alias | GATA transcription factor 2 | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G022710.4 | No alias | transcription factor *(A/B-GATA) | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G039720.5 | No alias | transcription factor *(A/B-GATA) | 0.04 | Orthogroups_2024-Update | |
LOC_Os02g43150 | No alias | GATA zinc finger domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g56250 | No alias | GATA zinc finger domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g44400 | No alias | GATA zinc finger domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10434815g0010 | No alias | (at2g45050 : 142.0) Encodes a member of the GATA factor... | 0.04 | Orthogroups_2024-Update | |
Pp1s241_14V6 | No alias | hypothetical protein similar to Arabidopsis thaliana... | 0.02 | Orthogroups_2024-Update | |
Seita.3G175200.1 | No alias | transcription factor *(A/B-GATA) | 0.04 | Orthogroups_2024-Update | |
Sobic.005G022400.2 | No alias | transcription factor *(A/B-GATA) | 0.03 | Orthogroups_2024-Update | |
Sobic.008G179800.1 | No alias | transcription factor *(A/B-GATA) | 0.03 | Orthogroups_2024-Update | |
Sopen09g034220 | No alias | GATA zinc finger | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
MF | GO:0043565 | sequence-specific DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Predicted GO |
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | Predicted GO |
MF | GO:0003779 | actin binding | IEP | Predicted GO |
MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Predicted GO |
MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
BP | GO:0006497 | protein lipidation | IEP | Predicted GO |
BP | GO:0006505 | GPI anchor metabolic process | IEP | Predicted GO |
BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Predicted GO |
BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Predicted GO |
BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
BP | GO:0006817 | phosphate ion transport | IEP | Predicted GO |
BP | GO:0007165 | signal transduction | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008289 | lipid binding | IEP | Predicted GO |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
BP | GO:0009314 | response to radiation | IEP | Predicted GO |
BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0016301 | kinase activity | IEP | Predicted GO |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Predicted GO |
MF | GO:0019900 | kinase binding | IEP | Predicted GO |
MF | GO:0019901 | protein kinase binding | IEP | Predicted GO |
BP | GO:0031399 | regulation of protein modification process | IEP | Predicted GO |
BP | GO:0036211 | protein modification process | IEP | Predicted GO |
BP | GO:0042325 | regulation of phosphorylation | IEP | Predicted GO |
BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
BP | GO:0043549 | regulation of kinase activity | IEP | Predicted GO |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Predicted GO |
BP | GO:0045859 | regulation of protein kinase activity | IEP | Predicted GO |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046486 | glycerolipid metabolic process | IEP | Predicted GO |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Predicted GO |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0051338 | regulation of transferase activity | IEP | Predicted GO |
BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Predicted GO |
BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 253 | 287 |
No external refs found! |