Description : auxin response factor 1
Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.07G272800 | |
Cluster | HCCA clusters: Cluster_409 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
117217 | No alias | auxin response factor 6 | 0.02 | Orthogroups_2024-Update | |
424114 | No alias | auxin response factor 6 | 0.03 | Orthogroups_2024-Update | |
At5g62000 | No alias | Auxin response factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JM3] | 0.04 | Orthogroups_2024-Update | |
Bradi3g40437 | No alias | Transcriptional factor B3 family protein /... | 0.05 | Orthogroups_2024-Update | |
Bradi4g07470 | No alias | auxin response factor 2 | 0.04 | Orthogroups_2024-Update | |
Brara.H01893.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Glyma.01G103500 | No alias | auxin response factor 9 | 0.04 | Orthogroups_2024-Update | |
Glyma.03G070500 | No alias | auxin response factor 9 | 0.05 | Orthogroups_2024-Update | |
Glyma.09G072200 | No alias | Transcriptional factor B3 family protein /... | 0.05 | Orthogroups_2024-Update | |
Glyma.15G091000 | No alias | auxin response factor 8 | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G106280.1 | No alias | ARF-type transcription factor | 0.04 | Orthogroups_2024-Update | |
MA_2237g0020 | No alias | (at4g30080 : 537.0) Involved in root cap cell... | 0.02 | Orthogroups_2024-Update | |
PSME_00023239-RA | No alias | (at1g30330 : 665.0) Encodes a member of the auxin... | 0.04 | Orthogroups_2024-Update | |
Potri.002G172500 | No alias | auxin response factor 11 | 0.03 | Orthogroups_2024-Update | |
Potri.003G142100 | No alias | auxin response factor 9 | 0.03 | Orthogroups_2024-Update | |
Potri.003G163600 | No alias | auxin response factor 2 | 0.03 | Orthogroups_2024-Update | |
Potri.011G091900 | No alias | auxin response factor 6 | 0.03 | Orthogroups_2024-Update | |
Pp1s119_32V6 | No alias | auxin response | 0.02 | Orthogroups_2024-Update | |
Pp1s64_138V6 | No alias | arf1-binding protein | 0.02 | Orthogroups_2024-Update | |
Seita.3G020000.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Seita.4G257800.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Sobic.003G298600.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
BP | GO:0009725 | response to hormone | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0006996 | organelle organization | IEP | Predicted GO |
BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
BP | GO:0007030 | Golgi organization | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030127 | COPII vesicle coat | IEP | Predicted GO |
CC | GO:0030131 | clathrin adaptor complex | IEP | Predicted GO |
MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
BP | GO:0048193 | Golgi vesicle transport | IEP | Predicted GO |
BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
No external refs found! |