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  5. Sobic.002G292900.1

Sobic.002G292900.1


Description : E3 ubiquitin ligase *(PIR)


Gene families : OG_42_0001015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G292900.1
Cluster HCAA Clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Seita.2G303300.1 No alias E3 ubiquitin ligase *(PIR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007009 plasma membrane organization IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0017121 plasma membrane phospholipid scrambling IEP Predicted GO
MF GO:0017128 phospholipid scramblase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0034204 lipid translocation IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045332 phospholipid translocation IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0051879 Hsp90 protein binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0097035 regulation of membrane lipid distribution IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!