Coexpression cluster: Cluster_59 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 37.69% (49/130) 0.8 2.1e-05 0.006774
GO:0003824 catalytic activity 23.08% (30/130) 1.09 4.4e-05 0.007161
GO:0036094 small molecule binding 13.08% (17/130) 1.54 7.4e-05 0.007961
GO:0000166 nucleotide binding 12.31% (16/130) 1.51 0.000154 0.008292
GO:1901265 nucleoside phosphate binding 12.31% (16/130) 1.51 0.000154 0.008292
GO:0019001 guanyl nucleotide binding 3.85% (5/130) 2.8 0.000776 0.008974
GO:1901360 organic cyclic compound metabolic process 9.23% (12/130) 1.57 0.00075 0.008998
GO:0001882 nucleoside binding 3.85% (5/130) 2.83 0.000725 0.00904
GO:0005525 GTP binding 3.85% (5/130) 2.84 0.000701 0.009089
GO:0032549 ribonucleoside binding 3.85% (5/130) 2.84 0.000701 0.009089
GO:0032550 purine ribonucleoside binding 3.85% (5/130) 2.84 0.000701 0.009089
GO:0001883 purine nucleoside binding 3.85% (5/130) 2.84 0.000701 0.009089
GO:0032561 guanyl ribonucleotide binding 3.85% (5/130) 2.84 0.000701 0.009089
GO:0097159 organic cyclic compound binding 16.15% (21/130) 1.22 0.000234 0.009486
GO:1901363 heterocyclic compound binding 16.15% (21/130) 1.22 0.000234 0.009486
GO:0043167 ion binding 14.62% (19/130) 1.29 0.00027 0.009709
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 2.31% (3/130) 4.11 0.000692 0.011215
GO:0006725 cellular aromatic compound metabolic process 9.23% (12/130) 1.59 0.000661 0.011275
GO:0017076 purine nucleotide binding 10.77% (14/130) 1.47 0.000528 0.0114
GO:0006139 nucleobase-containing compound metabolic process 9.23% (12/130) 1.69 0.000361 0.01169
GO:0043168 anion binding 12.31% (16/130) 1.52 0.000146 0.011788
GO:0097367 carbohydrate derivative binding 10.77% (14/130) 1.44 0.000659 0.011869
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 2.31% (3/130) 4.25 0.000521 0.012061
GO:0032553 ribonucleotide binding 10.77% (14/130) 1.45 0.00064 0.012197
GO:0008152 metabolic process 17.69% (23/130) 0.99 0.001108 0.012374
GO:0032555 purine ribonucleotide binding 10.77% (14/130) 1.48 0.000501 0.012492
GO:0046483 heterocycle metabolic process 9.23% (12/130) 1.6 0.000631 0.012782
GO:0005975 carbohydrate metabolic process 3.85% (5/130) 2.95 0.000492 0.013272
GO:0005488 binding 23.85% (31/130) 0.8 0.001277 0.013789
GO:0035639 purine ribonucleoside triphosphate binding 10.77% (14/130) 1.49 0.000471 0.01387
GO:0044238 primary metabolic process 14.62% (19/130) 1.07 0.001616 0.016891
GO:0034641 cellular nitrogen compound metabolic process 9.23% (12/130) 1.42 0.001868 0.018915
GO:0008173 RNA methyltransferase activity 1.54% (2/130) 4.87 0.002064 0.020263
GO:0071704 organic substance metabolic process 14.62% (19/130) 1.01 0.002574 0.024527
GO:0006396 RNA processing 3.08% (4/130) 2.74 0.003127 0.028952
GO:1901070 guanosine-containing compound biosynthetic process 0.77% (1/130) 7.57 0.005263 0.040598
GO:0046037 GMP metabolic process 0.77% (1/130) 7.57 0.005263 0.040598
GO:0016426 tRNA (adenine) methyltransferase activity 0.77% (1/130) 7.57 0.005263 0.040598
GO:0006177 GMP biosynthetic process 0.77% (1/130) 7.57 0.005263 0.040598
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 0.77% (1/130) 7.57 0.005263 0.040598
GO:0003922 GMP synthase (glutamine-hydrolyzing) activity 0.77% (1/130) 7.57 0.005263 0.040598
GO:0055086 nucleobase-containing small molecule metabolic process 3.85% (5/130) 2.17 0.005242 0.047176
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum pennellii HCCA clusters Cluster_125 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_48 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_187 0.028 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_26 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_99 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_104 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_177 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_225 0.022 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_2 0.022 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_45 0.028 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_18 0.03 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.028 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_94 0.028 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_158 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0105 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_259 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_264 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_125 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_144 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_34 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_131 0.022 Orthogroups_2024-Update Compare
Sequences (130) (download table)

InterPro Domains

GO Terms

Family Terms