LOC_Os02g17280

Description : gamma-secretase subunit APH-1B, putative, expressed

Gene families : OG_42_0006396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006396_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g17280
Cluster	HCCA clusters: cluster_0058

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp2g13950.1	No alias	component APH1 of gamma secretase complex	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
BP	GO:0016485	protein processing	IEA	InterProScan predictions
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	IEA	InterProScan predictions
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0003712	transcription coregulator activity	IEP	Predicted GO
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
BP	GO:0006488	dolichol-linked oligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Predicted GO
MF	GO:0009982	pseudouridine synthase activity	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
BP	GO:0010167	response to nitrate	IEP	Predicted GO
BP	GO:0015698	inorganic anion transport	IEP	Predicted GO
BP	GO:0015706	nitrate transport	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO
BP	GO:0071705	nitrogen compound transport	IEP	Predicted GO
BP	GO:1901698	response to nitrogen compound	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR009294	Aph-1	2	235

External Links

No external refs found!