1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre12.g533750

Cre12.g533750


Description : ubiquitin protein ligase 5


Gene families : OG_42_0001767 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001767_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre12.g533750
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G072720.2 No alias E3 ubiquitin ligase *(UPL5) 0.01 Orthogroups_2024-Update
MA_15599g0010 No alias (at4g12570 : 512.0) Knock-out mutants showed accelerated... 0.01 Orthogroups_2024-Update
Mp1g07640.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Orthogroups_2024-Update
PSME_00047296-RA No alias (at4g12570 : 414.0) Knock-out mutants showed accelerated... 0.01 Orthogroups_2024-Update
Potri.016G059800 No alias ubiquitin protein ligase 5 0.01 Orthogroups_2024-Update
Sobic.002G245000.1 No alias E3 ubiquitin ligase *(UPL5) 0.02 Orthogroups_2024-Update
Solyc05g054080 No alias E3 ubiquitin-protein ligase-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen09g019300 No alias HECT-domain (ubiquitin-transferase) 0.01 Orthogroups_2024-Update
evm.model.tig00000655.25 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR000569 HECT_dom 698 962
IPR000569 HECT_dom 1458 1495
No external refs found!