Coexpression cluster: Cluster_145 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006364 rRNA processing 7.69% (4/52) 6.37 0.0 1.1e-05
GO:0016072 rRNA metabolic process 7.69% (4/52) 6.37 0.0 1.1e-05
GO:0016070 RNA metabolic process 13.46% (7/52) 3.73 1e-06 4.3e-05
GO:0034470 ncRNA processing 7.69% (4/52) 5.06 6e-06 0.000224
GO:0016741 transferase activity, transferring one-carbon groups 7.69% (4/52) 4.19 6.9e-05 0.001211
GO:0090304 nucleic acid metabolic process 13.46% (7/52) 2.78 6.7e-05 0.001352
GO:0006139 nucleobase-containing compound metabolic process 15.38% (8/52) 2.43 0.000106 0.001495
GO:0034660 ncRNA metabolic process 7.69% (4/52) 4.22 6.4e-05 0.001497
GO:0008168 methyltransferase activity 7.69% (4/52) 4.28 5.4e-05 0.001536
GO:0006396 RNA processing 7.69% (4/52) 4.06 9.8e-05 0.001538
GO:0006725 cellular aromatic compound metabolic process 15.38% (8/52) 2.33 0.00017 0.001993
GO:1901360 organic cyclic compound metabolic process 15.38% (8/52) 2.31 0.000187 0.00203
GO:0046483 heterocycle metabolic process 15.38% (8/52) 2.34 0.000164 0.002097
GO:0022613 ribonucleoprotein complex biogenesis 3.85% (2/52) 6.43 0.000236 0.00222
GO:0042254 ribosome biogenesis 3.85% (2/52) 6.43 0.000236 0.00222
GO:0044085 cellular component biogenesis 3.85% (2/52) 6.31 0.000283 0.002494
GO:0034641 cellular nitrogen compound metabolic process 15.38% (8/52) 2.15 0.000386 0.003201
GO:0005732 small nucleolar ribonucleoprotein complex 1.92% (1/52) 8.89 0.002105 0.014841
GO:0044452 nucleolar part 1.92% (1/52) 8.89 0.002105 0.014841
GO:0034457 Mpp10 complex 1.92% (1/52) 8.89 0.002105 0.014841
GO:0097659 nucleic acid-templated transcription 3.85% (2/52) 4.61 0.003064 0.019638
GO:0006351 transcription, DNA-templated 3.85% (2/52) 4.61 0.003064 0.019638
GO:0044237 cellular metabolic process 17.31% (9/52) 1.46 0.004779 0.0293
GO:0005737 cytoplasm 3.85% (2/52) 4.19 0.005388 0.031656
GO:0140102 catalytic activity, acting on a rRNA 1.92% (1/52) 7.31 0.006302 0.034178
GO:0008649 rRNA methyltransferase activity 1.92% (1/52) 7.31 0.006302 0.034178
GO:0032774 RNA biosynthetic process 3.85% (2/52) 3.83 0.008806 0.045985
GO:0003674 molecular_function 36.54% (19/52) 0.76 0.009846 0.049582
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_19 0.045 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_26 0.047 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_55 0.04 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_164 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_318 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.031 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.037 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_122 0.04 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_26 0.061 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_54 0.029 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_99 0.026 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_13 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_82 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_287 0.027 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_1 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_19 0.027 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_45 0.022 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_47 0.025 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_87 0.03 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_216 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_5 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_26 0.029 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_218 0.032 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.026 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_118 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_243 0.036 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.04 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_300 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_438 0.031 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_138 0.029 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_73 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_215 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0075 0.028 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0028 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0071 0.035 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0132 0.029 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_58 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_91 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.035 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_154 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_179 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_181 0.037 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_264 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_326 0.043 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_91 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_246 0.041 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_17 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.033 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.039 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_125 0.026 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_163 0.035 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_259 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_45 0.046 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.031 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_104 0.031 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_108 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_128 0.031 Orthogroups_2024-Update Compare
Sequences (52) (download table)

InterPro Domains

GO Terms

Family Terms