Coexpression cluster: Cluster_73 (HCAA Clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0032508 DNA duplex unwinding 8.33% (6/72) 8.3 0.0 0.0
GO:0032392 DNA geometric change 8.33% (6/72) 8.3 0.0 0.0
GO:0051276 chromosome organization 9.72% (7/72) 6.57 0.0 0.0
GO:0003677 DNA binding 25.0% (18/72) 3.19 0.0 0.0
GO:0071103 DNA conformation change 8.33% (6/72) 7.23 0.0 0.0
GO:0006259 DNA metabolic process 12.5% (9/72) 5.04 0.0 0.0
GO:0006996 organelle organization 9.72% (7/72) 5.7 0.0 0.0
GO:0003676 nucleic acid binding 27.78% (20/72) 2.33 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 15.28% (11/72) 3.0 0.0 2e-06
GO:0046483 heterocycle metabolic process 15.28% (11/72) 2.84 0.0 6e-06
GO:0006725 cellular aromatic compound metabolic process 15.28% (11/72) 2.85 0.0 6e-06
GO:1901360 organic cyclic compound metabolic process 15.28% (11/72) 2.8 0.0 7e-06
GO:0006260 DNA replication 5.56% (4/72) 5.89 1e-06 9e-06
GO:0016043 cellular component organization 9.72% (7/72) 3.74 1e-06 1.3e-05
GO:0090304 nucleic acid metabolic process 12.5% (9/72) 3.09 1e-06 1.3e-05
GO:0071840 cellular component organization or biogenesis 9.72% (7/72) 3.58 2e-06 2.4e-05
GO:0006269 DNA replication, synthesis of RNA primer 2.78% (2/72) 8.89 4e-06 4.7e-05
GO:0034641 cellular nitrogen compound metabolic process 15.28% (11/72) 2.37 8e-06 8.2e-05
GO:1901363 heterocyclic compound binding 31.94% (23/72) 1.24 4.9e-05 0.000445
GO:0097159 organic cyclic compound binding 31.94% (23/72) 1.24 4.9e-05 0.000445
GO:0005524 ATP binding 16.67% (12/72) 1.85 0.00011 0.000951
GO:0008144 drug binding 16.67% (12/72) 1.78 0.000174 0.001439
GO:0035639 purine ribonucleoside triphosphate binding 16.67% (12/72) 1.67 0.000331 0.002621
GO:0009987 cellular process 25.0% (18/72) 1.22 0.000457 0.003464
GO:0005488 binding 40.28% (29/72) 0.84 0.000513 0.003592
GO:0009059 macromolecule biosynthetic process 8.33% (6/72) 2.58 0.000506 0.003687
GO:0030554 adenyl nucleotide binding 16.67% (12/72) 1.58 0.000599 0.003896
GO:0032559 adenyl ribonucleotide binding 16.67% (12/72) 1.58 0.000588 0.003965
GO:0000166 nucleotide binding 18.06% (13/72) 1.41 0.00101 0.00613
GO:1901265 nucleoside phosphate binding 18.06% (13/72) 1.41 0.00101 0.00613
GO:0032555 purine ribonucleotide binding 16.67% (12/72) 1.44 0.001409 0.008013
GO:0036094 small molecule binding 18.06% (13/72) 1.37 0.001366 0.008022
GO:0017076 purine nucleotide binding 16.67% (12/72) 1.43 0.001455 0.008025
GO:0032553 ribonucleotide binding 16.67% (12/72) 1.42 0.001527 0.008173
GO:0097367 carbohydrate derivative binding 16.67% (12/72) 1.41 0.001608 0.008361
GO:0044249 cellular biosynthetic process 9.72% (7/72) 2.03 0.001656 0.00837
GO:0003896 DNA primase activity 1.39% (1/72) 8.89 0.00211 0.010377
GO:1901576 organic substance biosynthetic process 9.72% (7/72) 1.92 0.0025 0.011973
GO:1905462 regulation of DNA duplex unwinding 1.39% (1/72) 7.89 0.004215 0.016321
GO:1905463 negative regulation of DNA duplex unwinding 1.39% (1/72) 7.89 0.004215 0.016321
GO:1905774 regulation of DNA helicase activity 1.39% (1/72) 7.89 0.004215 0.016321
GO:1905775 negative regulation of DNA helicase activity 1.39% (1/72) 7.89 0.004215 0.016321
GO:0042555 MCM complex 1.39% (1/72) 7.89 0.004215 0.016321
GO:0051095 regulation of helicase activity 1.39% (1/72) 7.89 0.004215 0.016321
GO:0051097 negative regulation of helicase activity 1.39% (1/72) 7.89 0.004215 0.016321
GO:0009058 biosynthetic process 9.72% (7/72) 1.77 0.004471 0.016951
GO:0003690 double-stranded DNA binding 2.78% (2/72) 4.27 0.004841 0.017981
GO:0043168 anion binding 16.67% (12/72) 1.25 0.004199 0.019104
GO:0140097 catalytic activity, acting on DNA 2.78% (2/72) 4.4 0.004097 0.019122
GO:0004386 helicase activity 2.78% (2/72) 4.13 0.005851 0.021297
GO:2001251 negative regulation of chromosome organization 1.39% (1/72) 7.3 0.006316 0.022105
GO:0009263 deoxyribonucleotide biosynthetic process 1.39% (1/72) 7.3 0.006316 0.022105
GO:0006270 DNA replication initiation 1.39% (1/72) 6.89 0.008412 0.028352
GO:0009262 deoxyribonucleotide metabolic process 1.39% (1/72) 6.89 0.008412 0.028352
GO:0043086 negative regulation of catalytic activity 1.39% (1/72) 6.57 0.010504 0.030835
GO:0033044 regulation of chromosome organization 1.39% (1/72) 6.57 0.010504 0.030835
GO:0010639 negative regulation of organelle organization 1.39% (1/72) 6.57 0.010504 0.030835
GO:0051346 negative regulation of hydrolase activity 1.39% (1/72) 6.57 0.010504 0.030835
GO:0044092 negative regulation of molecular function 1.39% (1/72) 6.57 0.010504 0.030835
GO:0051129 negative regulation of cellular component organization 1.39% (1/72) 6.57 0.010504 0.030835
GO:0005634 nucleus 4.17% (3/72) 2.79 0.009398 0.031099
GO:0033554 cellular response to stress 2.78% (2/72) 3.62 0.011596 0.032469
GO:0006974 cellular response to DNA damage stimulus 2.78% (2/72) 3.62 0.011596 0.032469
GO:0051716 cellular response to stimulus 2.78% (2/72) 3.62 0.011596 0.032469
GO:0006281 DNA repair 2.78% (2/72) 3.72 0.010198 0.033145
GO:0034654 nucleobase-containing compound biosynthetic process 4.17% (3/72) 2.62 0.012957 0.035729
GO:0034645 cellular macromolecule biosynthetic process 5.56% (4/72) 2.13 0.013249 0.035991
GO:0043231 intracellular membrane-bounded organelle 4.17% (3/72) 2.52 0.015647 0.041271
GO:0043227 membrane-bounded organelle 4.17% (3/72) 2.52 0.015647 0.041271
GO:0016779 nucleotidyltransferase activity 2.78% (2/72) 3.37 0.016257 0.042267
GO:0044260 cellular macromolecule metabolic process 13.89% (10/72) 1.1 0.017141 0.043939
GO:0003887 DNA-directed DNA polymerase activity 1.39% (1/72) 5.72 0.018829 0.047597
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_22 0.029 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_27 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_34 0.074 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_77 0.05 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_93 0.062 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_164 0.025 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_227 0.053 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_44 0.048 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_68 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_100 0.09 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_327 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_56 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_72 0.043 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_119 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_155 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_178 0.025 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_7 0.034 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_37 0.05 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_81 0.032 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_109 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_124 0.052 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_233 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_18 0.056 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_30 0.037 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_38 0.057 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_131 0.054 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_21 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_79 0.025 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_102 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_179 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_182 0.033 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_193 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_205 0.041 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_243 0.027 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_196 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_4 0.058 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_2 0.042 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_23 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_77 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_3 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_28 0.052 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_64 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_78 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_124 0.028 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_138 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_223 0.03 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_232 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_29 0.082 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_69 0.038 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_84 0.034 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_129 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_224 0.034 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_228 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_234 0.065 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_235 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_300 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_336 0.033 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_366 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_421 0.03 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_2 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_31 0.041 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_36 0.023 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_53 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_61 0.019 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_130 0.026 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_54 0.049 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_152 0.027 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_7 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_24 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_51 0.025 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_71 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_72 0.03 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_135 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0142 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0024 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0055 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.087 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_38 0.04 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_83 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_120 0.033 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_154 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_160 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_181 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.028 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_338 0.047 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_9 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_36 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_150 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_172 0.035 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_213 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_263 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_271 0.041 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_89 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_139 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_247 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_4 0.042 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_5 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_36 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_97 0.17 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_142 0.021 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_108 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_114 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_123 0.024 Orthogroups_2024-Update Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms