ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0032508 | DNA duplex unwinding | 8.33% (6/72) | 8.3 | 0.0 | 0.0 |
GO:0032392 | DNA geometric change | 8.33% (6/72) | 8.3 | 0.0 | 0.0 |
GO:0051276 | chromosome organization | 9.72% (7/72) | 6.57 | 0.0 | 0.0 |
GO:0003677 | DNA binding | 25.0% (18/72) | 3.19 | 0.0 | 0.0 |
GO:0071103 | DNA conformation change | 8.33% (6/72) | 7.23 | 0.0 | 0.0 |
GO:0006259 | DNA metabolic process | 12.5% (9/72) | 5.04 | 0.0 | 0.0 |
GO:0006996 | organelle organization | 9.72% (7/72) | 5.7 | 0.0 | 0.0 |
GO:0003676 | nucleic acid binding | 27.78% (20/72) | 2.33 | 0.0 | 0.0 |
GO:0006139 | nucleobase-containing compound metabolic process | 15.28% (11/72) | 3.0 | 0.0 | 2e-06 |
GO:0046483 | heterocycle metabolic process | 15.28% (11/72) | 2.84 | 0.0 | 6e-06 |
GO:0006725 | cellular aromatic compound metabolic process | 15.28% (11/72) | 2.85 | 0.0 | 6e-06 |
GO:1901360 | organic cyclic compound metabolic process | 15.28% (11/72) | 2.8 | 0.0 | 7e-06 |
GO:0006260 | DNA replication | 5.56% (4/72) | 5.89 | 1e-06 | 9e-06 |
GO:0016043 | cellular component organization | 9.72% (7/72) | 3.74 | 1e-06 | 1.3e-05 |
GO:0090304 | nucleic acid metabolic process | 12.5% (9/72) | 3.09 | 1e-06 | 1.3e-05 |
GO:0071840 | cellular component organization or biogenesis | 9.72% (7/72) | 3.58 | 2e-06 | 2.4e-05 |
GO:0006269 | DNA replication, synthesis of RNA primer | 2.78% (2/72) | 8.89 | 4e-06 | 4.7e-05 |
GO:0034641 | cellular nitrogen compound metabolic process | 15.28% (11/72) | 2.37 | 8e-06 | 8.2e-05 |
GO:1901363 | heterocyclic compound binding | 31.94% (23/72) | 1.24 | 4.9e-05 | 0.000445 |
GO:0097159 | organic cyclic compound binding | 31.94% (23/72) | 1.24 | 4.9e-05 | 0.000445 |
GO:0005524 | ATP binding | 16.67% (12/72) | 1.85 | 0.00011 | 0.000951 |
GO:0008144 | drug binding | 16.67% (12/72) | 1.78 | 0.000174 | 0.001439 |
GO:0035639 | purine ribonucleoside triphosphate binding | 16.67% (12/72) | 1.67 | 0.000331 | 0.002621 |
GO:0009987 | cellular process | 25.0% (18/72) | 1.22 | 0.000457 | 0.003464 |
GO:0005488 | binding | 40.28% (29/72) | 0.84 | 0.000513 | 0.003592 |
GO:0009059 | macromolecule biosynthetic process | 8.33% (6/72) | 2.58 | 0.000506 | 0.003687 |
GO:0030554 | adenyl nucleotide binding | 16.67% (12/72) | 1.58 | 0.000599 | 0.003896 |
GO:0032559 | adenyl ribonucleotide binding | 16.67% (12/72) | 1.58 | 0.000588 | 0.003965 |
GO:0000166 | nucleotide binding | 18.06% (13/72) | 1.41 | 0.00101 | 0.00613 |
GO:1901265 | nucleoside phosphate binding | 18.06% (13/72) | 1.41 | 0.00101 | 0.00613 |
GO:0032555 | purine ribonucleotide binding | 16.67% (12/72) | 1.44 | 0.001409 | 0.008013 |
GO:0036094 | small molecule binding | 18.06% (13/72) | 1.37 | 0.001366 | 0.008022 |
GO:0017076 | purine nucleotide binding | 16.67% (12/72) | 1.43 | 0.001455 | 0.008025 |
GO:0032553 | ribonucleotide binding | 16.67% (12/72) | 1.42 | 0.001527 | 0.008173 |
GO:0097367 | carbohydrate derivative binding | 16.67% (12/72) | 1.41 | 0.001608 | 0.008361 |
GO:0044249 | cellular biosynthetic process | 9.72% (7/72) | 2.03 | 0.001656 | 0.00837 |
GO:0003896 | DNA primase activity | 1.39% (1/72) | 8.89 | 0.00211 | 0.010377 |
GO:1901576 | organic substance biosynthetic process | 9.72% (7/72) | 1.92 | 0.0025 | 0.011973 |
GO:1905462 | regulation of DNA duplex unwinding | 1.39% (1/72) | 7.89 | 0.004215 | 0.016321 |
GO:1905463 | negative regulation of DNA duplex unwinding | 1.39% (1/72) | 7.89 | 0.004215 | 0.016321 |
GO:1905774 | regulation of DNA helicase activity | 1.39% (1/72) | 7.89 | 0.004215 | 0.016321 |
GO:1905775 | negative regulation of DNA helicase activity | 1.39% (1/72) | 7.89 | 0.004215 | 0.016321 |
GO:0042555 | MCM complex | 1.39% (1/72) | 7.89 | 0.004215 | 0.016321 |
GO:0051095 | regulation of helicase activity | 1.39% (1/72) | 7.89 | 0.004215 | 0.016321 |
GO:0051097 | negative regulation of helicase activity | 1.39% (1/72) | 7.89 | 0.004215 | 0.016321 |
GO:0009058 | biosynthetic process | 9.72% (7/72) | 1.77 | 0.004471 | 0.016951 |
GO:0003690 | double-stranded DNA binding | 2.78% (2/72) | 4.27 | 0.004841 | 0.017981 |
GO:0043168 | anion binding | 16.67% (12/72) | 1.25 | 0.004199 | 0.019104 |
GO:0140097 | catalytic activity, acting on DNA | 2.78% (2/72) | 4.4 | 0.004097 | 0.019122 |
GO:0004386 | helicase activity | 2.78% (2/72) | 4.13 | 0.005851 | 0.021297 |
GO:2001251 | negative regulation of chromosome organization | 1.39% (1/72) | 7.3 | 0.006316 | 0.022105 |
GO:0009263 | deoxyribonucleotide biosynthetic process | 1.39% (1/72) | 7.3 | 0.006316 | 0.022105 |
GO:0006270 | DNA replication initiation | 1.39% (1/72) | 6.89 | 0.008412 | 0.028352 |
GO:0009262 | deoxyribonucleotide metabolic process | 1.39% (1/72) | 6.89 | 0.008412 | 0.028352 |
GO:0043086 | negative regulation of catalytic activity | 1.39% (1/72) | 6.57 | 0.010504 | 0.030835 |
GO:0033044 | regulation of chromosome organization | 1.39% (1/72) | 6.57 | 0.010504 | 0.030835 |
GO:0010639 | negative regulation of organelle organization | 1.39% (1/72) | 6.57 | 0.010504 | 0.030835 |
GO:0051346 | negative regulation of hydrolase activity | 1.39% (1/72) | 6.57 | 0.010504 | 0.030835 |
GO:0044092 | negative regulation of molecular function | 1.39% (1/72) | 6.57 | 0.010504 | 0.030835 |
GO:0051129 | negative regulation of cellular component organization | 1.39% (1/72) | 6.57 | 0.010504 | 0.030835 |
GO:0005634 | nucleus | 4.17% (3/72) | 2.79 | 0.009398 | 0.031099 |
GO:0033554 | cellular response to stress | 2.78% (2/72) | 3.62 | 0.011596 | 0.032469 |
GO:0006974 | cellular response to DNA damage stimulus | 2.78% (2/72) | 3.62 | 0.011596 | 0.032469 |
GO:0051716 | cellular response to stimulus | 2.78% (2/72) | 3.62 | 0.011596 | 0.032469 |
GO:0006281 | DNA repair | 2.78% (2/72) | 3.72 | 0.010198 | 0.033145 |
GO:0034654 | nucleobase-containing compound biosynthetic process | 4.17% (3/72) | 2.62 | 0.012957 | 0.035729 |
GO:0034645 | cellular macromolecule biosynthetic process | 5.56% (4/72) | 2.13 | 0.013249 | 0.035991 |
GO:0043231 | intracellular membrane-bounded organelle | 4.17% (3/72) | 2.52 | 0.015647 | 0.041271 |
GO:0043227 | membrane-bounded organelle | 4.17% (3/72) | 2.52 | 0.015647 | 0.041271 |
GO:0016779 | nucleotidyltransferase activity | 2.78% (2/72) | 3.37 | 0.016257 | 0.042267 |
GO:0044260 | cellular macromolecule metabolic process | 13.89% (10/72) | 1.1 | 0.017141 | 0.043939 |
GO:0003887 | DNA-directed DNA polymerase activity | 1.39% (1/72) | 5.72 | 0.018829 | 0.047597 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Solanum lycopersicum | HCCA clusters | Cluster_22 | 0.029 | Orthogroups_2024-Update | Compare |
Solanum lycopersicum | HCCA clusters | Cluster_27 | 0.021 | Orthogroups_2024-Update | Compare |
Solanum lycopersicum | HCCA clusters | Cluster_34 | 0.074 | Orthogroups_2024-Update | Compare |
Solanum lycopersicum | HCCA clusters | Cluster_77 | 0.05 | Orthogroups_2024-Update | Compare |
Solanum lycopersicum | HCCA clusters | Cluster_93 | 0.062 | Orthogroups_2024-Update | Compare |
Solanum lycopersicum | HCCA clusters | Cluster_164 | 0.025 | Orthogroups_2024-Update | Compare |
Solanum lycopersicum | HCCA clusters | Cluster_227 | 0.053 | Orthogroups_2024-Update | Compare |
Solanum pennellii | HCCA clusters | Cluster_44 | 0.048 | Orthogroups_2024-Update | Compare |
Solanum pennellii | HCCA clusters | Cluster_68 | 0.021 | Orthogroups_2024-Update | Compare |
Solanum pennellii | HCCA clusters | Cluster_100 | 0.09 | Orthogroups_2024-Update | Compare |
Solanum pennellii | HCCA clusters | Cluster_327 | 0.024 | Orthogroups_2024-Update | Compare |
Arabidopsis thaliana | HCCA clusters | Cluster_56 | 0.021 | Orthogroups_2024-Update | Compare |
Arabidopsis thaliana | HCCA clusters | Cluster_72 | 0.043 | Orthogroups_2024-Update | Compare |
Arabidopsis thaliana | HCCA clusters | Cluster_119 | 0.023 | Orthogroups_2024-Update | Compare |
Arabidopsis thaliana | HCCA clusters | Cluster_155 | 0.025 | Orthogroups_2024-Update | Compare |
Arabidopsis thaliana | HCCA clusters | Cluster_178 | 0.025 | Orthogroups_2024-Update | Compare |
Chlamydomonas reinhardtii | HCCA clusters | Cluster_7 | 0.034 | Orthogroups_2024-Update | Compare |
Chlamydomonas reinhardtii | HCCA clusters | Cluster_37 | 0.05 | Orthogroups_2024-Update | Compare |
Chlamydomonas reinhardtii | HCCA clusters | Cluster_81 | 0.032 | Orthogroups_2024-Update | Compare |
Chlamydomonas reinhardtii | HCCA clusters | Cluster_109 | 0.02 | Orthogroups_2024-Update | Compare |
Chlamydomonas reinhardtii | HCCA clusters | Cluster_124 | 0.052 | Orthogroups_2024-Update | Compare |
Chlamydomonas reinhardtii | HCCA clusters | Cluster_233 | 0.02 | Orthogroups_2024-Update | Compare |
Klebsormidium nitens | HCCA clusters | Cluster_18 | 0.056 | Orthogroups_2024-Update | Compare |
Klebsormidium nitens | HCCA clusters | Cluster_30 | 0.037 | Orthogroups_2024-Update | Compare |
Klebsormidium nitens | HCCA clusters | Cluster_38 | 0.057 | Orthogroups_2024-Update | Compare |
Klebsormidium nitens | HCCA clusters | Cluster_131 | 0.054 | Orthogroups_2024-Update | Compare |
Picea abies | HCCA clusters | Cluster_21 | 0.021 | Orthogroups_2024-Update | Compare |
Picea abies | HCCA clusters | Cluster_79 | 0.025 | Orthogroups_2024-Update | Compare |
Picea abies | HCCA clusters | Cluster_102 | 0.02 | Orthogroups_2024-Update | Compare |
Picea abies | HCCA clusters | Cluster_179 | 0.021 | Orthogroups_2024-Update | Compare |
Picea abies | HCCA clusters | Cluster_182 | 0.033 | Orthogroups_2024-Update | Compare |
Picea abies | HCCA clusters | Cluster_193 | 0.023 | Orthogroups_2024-Update | Compare |
Picea abies | HCCA clusters | Cluster_205 | 0.041 | Orthogroups_2024-Update | Compare |
Picea abies | HCCA clusters | Cluster_243 | 0.027 | Orthogroups_2024-Update | Compare |
Physcomitrella patens | HCCA clusters | Cluster_196 | 0.021 | Orthogroups_2024-Update | Compare |
Porphyridium purpureum | HCCA clusters | Cluster_4 | 0.058 | Orthogroups_2024-Update | Compare |
Selaginella moellendorffii | HCCA clusters | Cluster_2 | 0.042 | Orthogroups_2024-Update | Compare |
Pseudotsuga menziesii | HCCA clusters | Cluster_23 | 0.021 | Orthogroups_2024-Update | Compare |
Pseudotsuga menziesii | HCCA clusters | Cluster_77 | 0.023 | Orthogroups_2024-Update | Compare |
Brachypodium distachyon | HCCA clusters | Cluster_3 | 0.023 | Orthogroups_2024-Update | Compare |
Brachypodium distachyon | HCCA clusters | Cluster_28 | 0.052 | Orthogroups_2024-Update | Compare |
Brachypodium distachyon | HCCA clusters | Cluster_64 | 0.024 | Orthogroups_2024-Update | Compare |
Brachypodium distachyon | HCCA clusters | Cluster_78 | 0.021 | Orthogroups_2024-Update | Compare |
Brachypodium distachyon | HCCA clusters | Cluster_124 | 0.028 | Orthogroups_2024-Update | Compare |
Brachypodium distachyon | HCCA clusters | Cluster_138 | 0.021 | Orthogroups_2024-Update | Compare |
Brachypodium distachyon | HCCA clusters | Cluster_223 | 0.03 | Orthogroups_2024-Update | Compare |
Brachypodium distachyon | HCCA clusters | Cluster_232 | 0.026 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_29 | 0.082 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_69 | 0.038 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_84 | 0.034 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_129 | 0.023 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_224 | 0.034 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_228 | 0.024 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_234 | 0.065 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_235 | 0.023 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_300 | 0.021 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_336 | 0.033 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_366 | 0.023 | Orthogroups_2024-Update | Compare |
Glycine max | HCCA clusters | Cluster_421 | 0.03 | Orthogroups_2024-Update | Compare |
Nicotiana attenuata | HCCA clusters | Cluster_2 | 0.02 | Orthogroups_2024-Update | Compare |
Nicotiana attenuata | HCCA clusters | Cluster_31 | 0.041 | Orthogroups_2024-Update | Compare |
Nicotiana attenuata | HCCA clusters | Cluster_36 | 0.023 | Orthogroups_2024-Update | Compare |
Nicotiana attenuata | HCCA clusters | Cluster_53 | 0.021 | Orthogroups_2024-Update | Compare |
Nicotiana attenuata | HCCA clusters | Cluster_61 | 0.019 | Orthogroups_2024-Update | Compare |
Nicotiana attenuata | HCCA clusters | Cluster_130 | 0.026 | Orthogroups_2024-Update | Compare |
Cyanophora paradoxa | HCCA clusters | Cluster_54 | 0.049 | Orthogroups_2024-Update | Compare |
Cyanophora paradoxa | HCCA clusters | Cluster_152 | 0.027 | Orthogroups_2024-Update | Compare |
Zea mays | HCCA clusters | Cluster_7 | 0.02 | Orthogroups_2024-Update | Compare |
Zea mays | HCCA clusters | Cluster_24 | 0.024 | Orthogroups_2024-Update | Compare |
Zea mays | HCCA clusters | Cluster_51 | 0.025 | Orthogroups_2024-Update | Compare |
Zea mays | HCCA clusters | Cluster_71 | 0.024 | Orthogroups_2024-Update | Compare |
Zea mays | HCCA clusters | Cluster_72 | 0.03 | Orthogroups_2024-Update | Compare |
Zea mays | HCCA clusters | Cluster_135 | 0.02 | Orthogroups_2024-Update | Compare |
Oryza sativa | HCCA clusters | cluster_0142 | 0.02 | Orthogroups_2024-Update | Compare |
Populus trichocarpa | HCCA clusters | cluster_0024 | 0.021 | Orthogroups_2024-Update | Compare |
Populus trichocarpa | HCCA clusters | cluster_0055 | 0.026 | Orthogroups_2024-Update | Compare |
Brassica rapa | HCAA Clusters | Cluster_24 | 0.087 | Orthogroups_2024-Update | Compare |
Brassica rapa | HCAA Clusters | Cluster_38 | 0.04 | Orthogroups_2024-Update | Compare |
Brassica rapa | HCAA Clusters | Cluster_83 | 0.02 | Orthogroups_2024-Update | Compare |
Brassica rapa | HCAA Clusters | Cluster_120 | 0.033 | Orthogroups_2024-Update | Compare |
Brassica rapa | HCAA Clusters | Cluster_154 | 0.027 | Orthogroups_2024-Update | Compare |
Brassica rapa | HCAA Clusters | Cluster_160 | 0.022 | Orthogroups_2024-Update | Compare |
Brassica rapa | HCAA Clusters | Cluster_181 | 0.023 | Orthogroups_2024-Update | Compare |
Brassica rapa | HCAA Clusters | Cluster_212 | 0.028 | Orthogroups_2024-Update | Compare |
Brassica rapa | HCAA Clusters | Cluster_338 | 0.047 | Orthogroups_2024-Update | Compare |
Hordeum vulgare | HCAA Clusters | Cluster_9 | 0.023 | Orthogroups_2024-Update | Compare |
Hordeum vulgare | HCAA Clusters | Cluster_36 | 0.023 | Orthogroups_2024-Update | Compare |
Hordeum vulgare | HCAA Clusters | Cluster_150 | 0.022 | Orthogroups_2024-Update | Compare |
Hordeum vulgare | HCAA Clusters | Cluster_172 | 0.035 | Orthogroups_2024-Update | Compare |
Hordeum vulgare | HCAA Clusters | Cluster_213 | 0.024 | Orthogroups_2024-Update | Compare |
Hordeum vulgare | HCAA Clusters | Cluster_263 | 0.024 | Orthogroups_2024-Update | Compare |
Hordeum vulgare | HCAA Clusters | Cluster_271 | 0.041 | Orthogroups_2024-Update | Compare |
Sorghum bicolor | HCAA Clusters | Cluster_89 | 0.021 | Orthogroups_2024-Update | Compare |
Sorghum bicolor | HCAA Clusters | Cluster_139 | 0.024 | Orthogroups_2024-Update | Compare |
Sorghum bicolor | HCAA Clusters | Cluster_174 | 0.02 | Orthogroups_2024-Update | Compare |
Sorghum bicolor | HCAA Clusters | Cluster_247 | 0.02 | Orthogroups_2024-Update | Compare |
Setaria italica | HCAA Clusters | Cluster_4 | 0.042 | Orthogroups_2024-Update | Compare |
Setaria italica | HCAA Clusters | Cluster_5 | 0.021 | Orthogroups_2024-Update | Compare |
Setaria italica | HCAA Clusters | Cluster_36 | 0.024 | Orthogroups_2024-Update | Compare |
Setaria italica | HCAA Clusters | Cluster_97 | 0.17 | Orthogroups_2024-Update | Compare |
Setaria italica | HCAA Clusters | Cluster_142 | 0.021 | Orthogroups_2024-Update | Compare |
Marchantia polymorpha | HCAA Clusters | Cluster_108 | 0.023 | Orthogroups_2024-Update | Compare |
Marchantia polymorpha | HCAA Clusters | Cluster_114 | 0.02 | Orthogroups_2024-Update | Compare |
Marchantia polymorpha | HCAA Clusters | Cluster_123 | 0.024 | Orthogroups_2024-Update | Compare |