Coexpression cluster: Cluster_143 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044271 cellular nitrogen compound biosynthetic process 19.67% (12/61) 3.76 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 22.95% (14/61) 3.2 0.0 0.0
GO:0005622 intracellular 13.11% (8/61) 4.75 0.0 0.0
GO:0044249 cellular biosynthetic process 19.67% (12/61) 3.24 0.0 0.0
GO:0044464 cell part 22.95% (14/61) 2.82 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 16.39% (10/61) 3.73 0.0 0.0
GO:1901576 organic substance biosynthetic process 19.67% (12/61) 3.17 0.0 0.0
GO:0009059 macromolecule biosynthetic process 16.39% (10/61) 3.66 0.0 0.0
GO:0009058 biosynthetic process 19.67% (12/61) 3.04 0.0 0.0
GO:0005840 ribosome 13.11% (8/61) 4.18 0.0 0.0
GO:0043604 amide biosynthetic process 13.11% (8/61) 4.06 0.0 0.0
GO:0044424 intracellular part 21.31% (13/61) 2.81 0.0 0.0
GO:0043043 peptide biosynthetic process 13.11% (8/61) 4.11 0.0 0.0
GO:0006412 translation 13.11% (8/61) 4.15 0.0 0.0
GO:0043228 non-membrane-bounded organelle 13.11% (8/61) 4.06 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 13.11% (8/61) 4.06 0.0 0.0
GO:0006518 peptide metabolic process 13.11% (8/61) 4.06 0.0 0.0
GO:0003735 structural constituent of ribosome 13.11% (8/61) 4.13 0.0 0.0
GO:0005198 structural molecule activity 13.11% (8/61) 4.02 0.0 0.0
GO:0043603 cellular amide metabolic process 13.11% (8/61) 4.0 0.0 0.0
GO:1990904 ribonucleoprotein complex 13.11% (8/61) 3.97 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 14.75% (9/61) 3.61 0.0 0.0
GO:0044444 cytoplasmic part 14.75% (9/61) 3.49 0.0 1e-06
GO:0009987 cellular process 31.15% (19/61) 1.93 0.0 2e-06
GO:0006807 nitrogen compound metabolic process 27.87% (17/61) 2.08 0.0 2e-06
GO:0032991 protein-containing complex 16.39% (10/61) 3.03 0.0 3e-06
GO:0044237 cellular metabolic process 27.87% (17/61) 2.01 1e-06 4e-06
GO:0071704 organic substance metabolic process 29.51% (18/61) 1.83 1e-06 1e-05
GO:0043170 macromolecule metabolic process 24.59% (15/61) 2.03 2e-06 1.8e-05
GO:0044238 primary metabolic process 27.87% (17/61) 1.81 3e-06 2.4e-05
GO:0044260 cellular macromolecule metabolic process 21.31% (13/61) 2.18 4e-06 2.7e-05
GO:1901564 organonitrogen compound metabolic process 22.95% (14/61) 2.07 4e-06 2.8e-05
GO:0043226 organelle 13.11% (8/61) 2.95 9e-06 5.4e-05
GO:0043229 intracellular organelle 13.11% (8/61) 2.95 9e-06 5.4e-05
GO:0005575 cellular_component 22.95% (14/61) 1.9 1.6e-05 9e-05
GO:0044267 cellular protein metabolic process 18.03% (11/61) 2.26 1.5e-05 9.1e-05
GO:0019538 protein metabolic process 19.67% (12/61) 2.1 1.8e-05 0.000105
GO:0008152 metabolic process 29.51% (18/61) 1.45 5.2e-05 0.00029
GO:0008150 biological_process 34.43% (21/61) 1.08 0.000438 0.00236
GO:0046483 heterocycle metabolic process 9.84% (6/61) 2.51 0.000643 0.003378
GO:0006725 cellular aromatic compound metabolic process 9.84% (6/61) 2.5 0.000678 0.003471
GO:1901360 organic cyclic compound metabolic process 9.84% (6/61) 2.47 0.00074 0.003701
GO:0019438 aromatic compound biosynthetic process 6.56% (4/61) 3.26 0.000827 0.003945
GO:0018130 heterocycle biosynthetic process 6.56% (4/61) 3.27 0.00082 0.004002
GO:0034227 tRNA thio-modification 1.64% (1/61) 10.02 0.000961 0.004294
GO:0043461 proton-transporting ATP synthase complex assembly 1.64% (1/61) 10.02 0.000961 0.004294
GO:0006450 regulation of translational fidelity 1.64% (1/61) 10.02 0.000961 0.004294
GO:1901362 organic cyclic compound biosynthetic process 6.56% (4/61) 3.12 0.001198 0.005243
GO:0042723 thiamine-containing compound metabolic process 1.64% (1/61) 9.02 0.001921 0.00747
GO:0009228 thiamine biosynthetic process 1.64% (1/61) 9.02 0.001921 0.00747
GO:0006772 thiamine metabolic process 1.64% (1/61) 9.02 0.001921 0.00747
GO:0042724 thiamine-containing compound biosynthetic process 1.64% (1/61) 9.02 0.001921 0.00747
GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity 1.64% (1/61) 9.02 0.001921 0.00747
GO:0003937 IMP cyclohydrolase activity 1.64% (1/61) 9.02 0.001921 0.00747
GO:0006139 nucleobase-containing compound metabolic process 8.2% (5/61) 2.41 0.002551 0.009741
GO:0019238 cyclohydrolase activity 1.64% (1/61) 8.44 0.00288 0.010611
GO:0070071 proton-transporting two-sector ATPase complex assembly 1.64% (1/61) 8.44 0.00288 0.010611
GO:0003674 molecular_function 40.98% (25/61) 0.75 0.002955 0.010699
GO:0005737 cytoplasm 3.28% (2/61) 4.48 0.003673 0.013074
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 1.64% (1/61) 8.02 0.003838 0.013214
GO:0010498 proteasomal protein catabolic process 1.64% (1/61) 8.02 0.003838 0.013214
GO:0048285 organelle fission 1.64% (1/61) 7.7 0.004796 0.015493
GO:0005094 Rho GDP-dissociation inhibitor activity 1.64% (1/61) 7.7 0.004796 0.015493
GO:0008097 5S rRNA binding 1.64% (1/61) 7.7 0.004796 0.015493
GO:0016559 peroxisome fission 1.64% (1/61) 7.7 0.004796 0.015493
GO:0034654 nucleobase-containing compound biosynthetic process 4.92% (3/61) 3.14 0.004911 0.015624
GO:0030163 protein catabolic process 1.64% (1/61) 7.44 0.005752 0.017013
GO:0031231 intrinsic component of peroxisomal membrane 1.64% (1/61) 7.44 0.005752 0.017013
GO:0005779 integral component of peroxisomal membrane 1.64% (1/61) 7.44 0.005752 0.017013
GO:0044439 peroxisomal part 1.64% (1/61) 7.44 0.005752 0.017013
GO:0044438 microbody part 1.64% (1/61) 7.44 0.005752 0.017013
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 1.64% (1/61) 7.22 0.006707 0.018534
GO:0031301 integral component of organelle membrane 1.64% (1/61) 7.22 0.006707 0.018534
GO:0031300 intrinsic component of organelle membrane 1.64% (1/61) 7.22 0.006707 0.018534
GO:0003676 nucleic acid binding 11.48% (7/61) 1.66 0.00657 0.018901
GO:0090304 nucleic acid metabolic process 6.56% (4/61) 2.43 0.006519 0.019014
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.64% (1/61) 6.85 0.008616 0.023498
GO:0006289 nucleotide-excision repair 1.64% (1/61) 6.7 0.009569 0.025761
GO:0003684 damaged DNA binding 1.64% (1/61) 6.56 0.01052 0.027966
GO:0030880 RNA polymerase complex 1.64% (1/61) 6.44 0.011471 0.030113
GO:0006400 tRNA modification 1.64% (1/61) 6.32 0.012422 0.032204
GO:0042364 water-soluble vitamin biosynthetic process 1.64% (1/61) 6.02 0.015266 0.037717
GO:0006766 vitamin metabolic process 1.64% (1/61) 6.02 0.015266 0.037717
GO:0006767 water-soluble vitamin metabolic process 1.64% (1/61) 6.02 0.015266 0.037717
GO:0009110 vitamin biosynthetic process 1.64% (1/61) 6.02 0.015266 0.037717
GO:0072528 pyrimidine-containing compound biosynthetic process 1.64% (1/61) 5.94 0.016213 0.03959
GO:0072527 pyrimidine-containing compound metabolic process 1.64% (1/61) 5.85 0.017159 0.040946
GO:0061695 transferase complex, transferring phosphorus-containing groups 1.64% (1/61) 5.85 0.017159 0.040946
GO:0005092 GDP-dissociation inhibitor activity 1.64% (1/61) 5.78 0.018103 0.042716
GO:0032774 RNA biosynthetic process 3.28% (2/61) 3.25 0.018971 0.043779
GO:0016070 RNA metabolic process 4.92% (3/61) 2.41 0.018965 0.044252
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.026 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_55 0.036 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_102 0.03 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_44 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_58 0.032 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_84 0.055 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_174 0.027 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_235 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.029 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_19 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_66 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_120 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_180 0.028 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_58 0.051 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_19 0.025 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_24 0.034 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_93 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_125 0.028 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_111 0.041 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_144 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_243 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_7 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_87 0.043 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_132 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_177 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_217 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_273 0.026 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_298 0.039 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_25 0.059 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_161 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_45 0.036 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_117 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_121 0.03 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.043 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_149 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_76 0.04 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_118 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_158 0.036 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_173 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_192 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_249 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_294 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_401 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_421 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_426 0.023 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_29 0.029 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_63 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_78 0.025 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_21 0.039 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_35 0.029 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_202 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0028 0.038 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0098 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.037 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.052 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_32 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_63 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_75 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_86 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_167 0.059 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_220 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_248 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.04 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_263 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_343 0.029 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.028 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_79 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_86 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_145 0.034 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_236 0.026 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_24 0.052 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_43 0.041 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_37 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_85 0.043 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_170 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_176 0.037 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_207 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_244 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_265 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_31 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_61 0.031 Orthogroups_2024-Update Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms