Coexpression cluster: Cluster_121 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0032991 protein-containing complex 21.05% (16/76) 2.95 0.0 0.0
GO:0044464 cell part 26.32% (20/76) 2.51 0.0 0.0
GO:0044424 intracellular part 25.0% (19/76) 2.62 0.0 0.0
GO:0044444 cytoplasmic part 14.47% (11/76) 3.21 0.0 2e-06
GO:0044422 organelle part 11.84% (9/76) 3.16 1e-06 3.6e-05
GO:0044446 intracellular organelle part 11.84% (9/76) 3.16 1e-06 3.6e-05
GO:0006518 peptide metabolic process 10.53% (8/76) 3.4 1e-06 4e-05
GO:0043603 cellular amide metabolic process 10.53% (8/76) 3.34 1e-06 4.6e-05
GO:0043043 peptide biosynthetic process 9.21% (7/76) 3.26 9e-06 0.000236
GO:0003735 structural constituent of ribosome 9.21% (7/76) 3.28 8e-06 0.000236
GO:0005622 intracellular 7.89% (6/76) 3.62 1e-05 0.00024
GO:0005198 structural molecule activity 9.21% (7/76) 3.17 1.3e-05 0.000249
GO:0043604 amide biosynthetic process 9.21% (7/76) 3.21 1.1e-05 0.000249
GO:0034641 cellular nitrogen compound metabolic process 15.79% (12/76) 2.17 1.2e-05 0.000257
GO:0006412 translation 9.21% (7/76) 3.28 8e-06 0.000258
GO:1990904 ribonucleoprotein complex 9.21% (7/76) 3.08 1.9e-05 0.000351
GO:0044451 nucleoplasm part 3.95% (3/76) 5.47 4.3e-05 0.000734
GO:1901566 organonitrogen compound biosynthetic process 10.53% (8/76) 2.61 5.1e-05 0.000817
GO:0044271 cellular nitrogen compound biosynthetic process 10.53% (8/76) 2.58 5.8e-05 0.000884
GO:0005840 ribosome 7.89% (6/76) 3.06 8.5e-05 0.001229
GO:0005575 cellular_component 26.32% (20/76) 1.31 9.8e-05 0.001344
GO:0043228 non-membrane-bounded organelle 7.89% (6/76) 2.85 0.000193 0.002418
GO:0043232 intracellular non-membrane-bounded organelle 7.89% (6/76) 2.85 0.000193 0.002418
GO:0016592 mediator complex 2.63% (2/76) 6.3 0.000288 0.003321
GO:0006400 tRNA modification 2.63% (2/76) 6.3 0.000288 0.003321
GO:0043226 organelle 10.53% (8/76) 2.19 0.000365 0.003622
GO:0043229 intracellular organelle 10.53% (8/76) 2.19 0.000365 0.003622
GO:0034645 cellular macromolecule biosynthetic process 9.21% (7/76) 2.41 0.000347 0.003699
GO:0006357 regulation of transcription by RNA polymerase II 2.63% (2/76) 6.18 0.00034 0.003768
GO:0009059 macromolecule biosynthetic process 9.21% (7/76) 2.34 0.000473 0.004536
GO:0044249 cellular biosynthetic process 11.84% (9/76) 1.91 0.000635 0.005895
GO:1901576 organic substance biosynthetic process 11.84% (9/76) 1.83 0.00092 0.00803
GO:0009451 RNA modification 2.63% (2/76) 5.49 0.000906 0.008153
GO:0044428 nuclear part 3.95% (3/76) 3.93 0.001033 0.008754
GO:0044432 endoplasmic reticulum part 2.63% (2/76) 5.13 0.001502 0.012013
GO:0008033 tRNA processing 2.63% (2/76) 5.13 0.001502 0.012013
GO:0042816 vitamin B6 metabolic process 1.32% (1/76) 8.88 0.002118 0.013262
GO:0005747 mitochondrial respiratory chain complex I 1.32% (1/76) 8.88 0.002118 0.013262
GO:0042823 pyridoxal phosphate biosynthetic process 1.32% (1/76) 8.88 0.002118 0.013262
GO:0045271 respiratory chain complex I 1.32% (1/76) 8.88 0.002118 0.013262
GO:0030964 NADH dehydrogenase complex 1.32% (1/76) 8.88 0.002118 0.013262
GO:0004359 glutaminase activity 1.32% (1/76) 8.88 0.002118 0.013262
GO:0042819 vitamin B6 biosynthetic process 1.32% (1/76) 8.88 0.002118 0.013262
GO:0042822 pyridoxal phosphate metabolic process 1.32% (1/76) 8.88 0.002118 0.013262
GO:0046184 aldehyde biosynthetic process 1.32% (1/76) 8.88 0.002118 0.013262
GO:0009058 biosynthetic process 11.84% (9/76) 1.68 0.001951 0.015183
GO:0003712 transcription coregulator activity 2.63% (2/76) 4.64 0.002963 0.018154
GO:0033176 proton-transporting V-type ATPase complex 1.32% (1/76) 7.88 0.004232 0.02216
GO:0034227 tRNA thio-modification 1.32% (1/76) 7.88 0.004232 0.02216
GO:0016471 vacuolar proton-transporting V-type ATPase complex 1.32% (1/76) 7.88 0.004232 0.02216
GO:0015934 large ribosomal subunit 1.32% (1/76) 7.88 0.004232 0.02216
GO:0005849 mRNA cleavage factor complex 1.32% (1/76) 7.88 0.004232 0.02216
GO:0006378 mRNA polyadenylation 1.32% (1/76) 7.88 0.004232 0.02216
GO:0044391 ribosomal subunit 1.32% (1/76) 7.88 0.004232 0.02216
GO:0016469 proton-transporting two-sector ATPase complex 1.32% (1/76) 7.88 0.004232 0.02216
GO:0098796 membrane protein complex 3.95% (3/76) 3.06 0.005703 0.029327
GO:0044437 vacuolar part 1.32% (1/76) 7.3 0.006341 0.029456
GO:0006465 signal peptide processing 1.32% (1/76) 7.3 0.006341 0.029456
GO:0031123 RNA 3'-end processing 1.32% (1/76) 7.3 0.006341 0.029456
GO:0005787 signal peptidase complex 1.32% (1/76) 7.3 0.006341 0.029456
GO:0031124 mRNA 3'-end processing 1.32% (1/76) 7.3 0.006341 0.029456
GO:0034470 ncRNA processing 2.63% (2/76) 4.13 0.0059 0.029812
GO:0006396 RNA processing 3.95% (3/76) 2.85 0.008542 0.037273
GO:1901617 organic hydroxy compound biosynthetic process 1.32% (1/76) 6.88 0.008446 0.037423
GO:0005739 mitochondrion 1.32% (1/76) 6.88 0.008446 0.037423
GO:0098803 respiratory chain complex 1.32% (1/76) 6.88 0.008446 0.037423
GO:0033588 Elongator holoenzyme complex 1.32% (1/76) 6.56 0.010547 0.043392
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 1.32% (1/76) 6.56 0.010547 0.043392
GO:0016485 protein processing 1.32% (1/76) 6.56 0.010547 0.043392
GO:0003729 mRNA binding 1.32% (1/76) 6.56 0.010547 0.043392
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.025 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_102 0.027 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_113 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_58 0.041 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_104 0.025 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_32 0.024 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_24 0.031 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_20 0.031 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_90 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_166 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_257 0.027 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_3 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_13 0.048 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_64 0.036 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_87 0.026 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_147 0.033 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_171 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_298 0.034 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_25 0.046 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_13 0.026 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_23 0.031 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_45 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_45 0.033 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_117 0.025 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_183 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_233 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.028 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_244 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_76 0.05 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_129 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_212 0.032 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_219 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_300 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_378 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_426 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_29 0.038 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_21 0.037 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_22 0.029 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_143 0.03 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0021 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0028 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.035 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.029 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_91 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_167 0.034 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_268 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.035 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_131 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_24 0.042 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_124 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.026 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_199 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_37 0.056 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_85 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_143 0.026 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_61 0.023 Orthogroups_2024-Update Compare
Sequences (76) (download table)

InterPro Domains

GO Terms

Family Terms